Pairwise Alignments

Query, 605 a.a., flavodoxin from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  480 bits (1236), Expect = e-140
 Identities = 275/615 (44%), Positives = 362/615 (58%), Gaps = 23/615 (3%)

Query: 6   LSQINVFPVKSLGGLALSSAWVEKQGLTFDRRFMLALSDGSMVTARKFPQMVLIKTALR- 64
           LS I+++PVKS+G  +L  A V  +GL  DRRFM+    G  +TAR  P + LI    + 
Sbjct: 4   LSAIHIYPVKSMGAQSLHQARVCPEGLAGDRRFMVIKPSGDFITARTHPALQLITPLGQD 63

Query: 65  ---HDGVL-FSAQGHPSLTIRYADFKFQPVPAQVWSDNFTAYTTTDEADDWFSQVLGIRV 120
              H G L  S  G P LT+   +F+  PV  QVW D F A +   +AD W S +LG   
Sbjct: 64  EDIHAGRLRLSYPGQPDLTLDVCEFEKAPVKTQVWKDGFEALSIHAQADTWISTLLGEPA 123

Query: 121 ELLYSGEQSNRVREKVGHNVSFADGYPLLVISQASLDELNRRSPEFHSMDQFRTNLVVSG 180
            L++ GE SNR REK+   VSFADGYPLL+IS+ASL +LN R+     M QFRTNLVVS 
Sbjct: 124 RLIWLGETSNRFREKLDTRVSFADGYPLLLISEASLADLNLRADAISRMSQFRTNLVVSD 183

Query: 181 TEPFAEDSWKRIRIGEVEFEAVKPCERCILTTVEVKKGAFRPTKEPLRTLSQFRANERGG 240
           TE FAED WKRIRIGEVEF   KPC RC++TT+      F P  EPL TLS+FR  ++G 
Sbjct: 184 TEAFAEDGWKRIRIGEVEFLLAKPCSRCVMTTIIPGTDRFHPQGEPLATLSKFRKTQQGD 243

Query: 241 VFFGQNLVAKNEGMIRAGDPIEVLEYKEKEVYPDQGISHFTLTCVEREEIARDFVTFWLE 300
           V FGQNL+A NEG+I  GD + +LE +  E YP++  +  +L  + +E IA+DF+    E
Sbjct: 244 VNFGQNLIALNEGIIHEGDDVVILEEQPGEHYPNRAPAKRSLRLITKEPIAKDFMGLSFE 303

Query: 301 PTQ-EIATQYFPGQYLPIEMVIEGEPVQRYYTLSSSPSRPGRLAISVKRIDGGRVSNWLQ 359
               +    + PGQ+L     I G    R Y+L+ +PS  G   I VKR   G +SNWL 
Sbjct: 304 AADGKPLPTFLPGQHLVFAFDINGTRHIRRYSLTHAPSE-GNYHIGVKRTRDGLISNWLH 362

Query: 360 ENLQIGTTLTAQHPTGHFHLDTTALQPLLLLSAGSGVTPMLSMLRYLADHNQLDDVV--- 416
           + L +G T+    P G F     A  PLLL+SAGSGVTPML+M+R      +L  V    
Sbjct: 363 DELTVGDTVLCSRPEGRF--IPKAGYPLLLISAGSGVTPMLAMVRTALALGKLKGVSLPL 420

Query: 417 ----FYHQCRSEQDIPCQAELDALAKQHAGLTLIYALTQPSPQWQGEQGRLSLSHIKRIP 472
               F HQCRSE DIPC   L+      AG+TL   LT P  +W+G QGR+S S +  +P
Sbjct: 421 AHIHFIHQCRSEDDIPCHKSLEDFVA--AGMTLELNLTTPGIEWKGNQGRVSASQLAAVP 478

Query: 473 NLVSRQVFVCGPDGFMQKAKNLLLKQGVAESAYHQEAFG---TLQVAPREKKAVTLSFNG 529
            L  R  F+CGP GFMQ  + +L + G+  S  H E+FG   +++  P E+  + +   G
Sbjct: 479 LLAERDAFICGPSGFMQTVEGMLTQGGMVTSQIHCESFGGLTSVEARPPEQLKIQIGEKG 538

Query: 530 IQVSADNQKTLLEHAEDAGVRIPNSCRAGICGACKVKVKSGLVEQPKVPALMDHERSMGM 589
                DNQ++LL  AE  G+++  SCRAGICG+CK K+ +G V QPK  AL D ER  G+
Sbjct: 539 F--VGDNQQSLLTQAEAQGIKLLWSCRAGICGSCKCKLTAGEVHQPKAEALSDAEREQGI 596

Query: 590 ALACCSVANTDLDVE 604
            LACC+   TD+ +E
Sbjct: 597 ILACCATPLTDVSLE 611