Pairwise Alignments

Query, 605 a.a., flavodoxin from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., iron-sulfur cluster-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  200 bits (508), Expect = 9e-56
 Identities = 123/338 (36%), Positives = 186/338 (55%), Gaps = 19/338 (5%)

Query: 280 FTLTCVEREEIARDFVTFWLEPTQE-IATQYFPGQYLPIEMVIEGEPVQRYYTLSSSPSR 338
           F L C+ER +   D VTF  E   E +   Y PGQ++ + + I GEP  R YTLSSSPSR
Sbjct: 24  FRLCCIERIDETHDVVTFRFEAAGEPVRFSYKPGQFITLLLEIGGEPHSRAYTLSSSPSR 83

Query: 339 PGRLAISVKRIDGGRVSNWLQENLQIGTTLTAQHPTGHFHLDTTALQPLLLLSAGSGVTP 398
           P  ++I+VKR++GG+VSN+L +NL+ G  L A  P+G F+L        L LSAG G+TP
Sbjct: 84  PYSISITVKRVEGGKVSNYLIDNLRPGHALDAMGPSGSFNLVDIPADRYLFLSAGCGITP 143

Query: 399 MLSMLRYLADHNQLDDVVFYHQCRSEQDIPCQAELDALAKQHAGLTLIYALTQPS-PQWQ 457
           M SM R+L D     D+ F H  RS  D+    +L+++A  H+G  L Y + Q + P W 
Sbjct: 144 MFSMSRWLTDTRVGADITFVHSARSVDDLIFAPKLESMANNHSGFRLGYVIEQGNCPDWP 203

Query: 458 GE---QGRLSLSHI-KRIPNLVSRQVFVCGPDGFMQKAKNLLLKQGVAESAYHQEAFGTL 513
                 GRL+LS +   + +   R ++VCGP+ +M   + ++   G A S +H+E+FG  
Sbjct: 204 YAPVLPGRLTLSGLDSLVSDWRERTLYVCGPEAYMAAVEAMVRDAGFAMSRFHKESFG-- 261

Query: 514 QVAPREKKAVTLSFNGIQVSADNQ-------KTLLEHAEDAGVRIPNSCRAGICGACKVK 566
               +    V  S  G  +   ++         LLE  E   + I  +CR+G+CGACK +
Sbjct: 262 ----KPGAPVKSSGQGFMLKVGDKLHPLGESGLLLEGIEALKLPIIAACRSGVCGACKCQ 317

Query: 567 VKSGLVEQPKVPALMDHERSMGMALACCSVANTDLDVE 604
           V  G VE+     L + +++ GM LAC + A +++ ++
Sbjct: 318 VLEGDVERLSEMTLTEEDKANGMVLACSARALSNISLK 355