Pairwise Alignments

Query, 605 a.a., flavodoxin from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  181 bits (459), Expect = 4e-50
 Identities = 112/316 (35%), Positives = 163/316 (51%), Gaps = 23/316 (7%)

Query: 309 YFPGQYLPIEMVIEGEPVQRYYTLSSSPSRPGRLAISVKRIDGGRVSNWLQENLQIGTTL 368
           Y PGQ++   + I GE   R YTLSS+PSRP  L +++KR+DGG VSN+L ++LQ G T+
Sbjct: 5   YKPGQFITFVLEINGEQACRSYTLSSTPSRPYSLMVTIKRVDGGLVSNYLIDHLQPGQTV 64

Query: 369 TAQHPTGHFHLDTTALQPLLLLSAGSGVTPMLSMLRYLADHNQLDDVVFYHQCRSEQDIP 428
               PTG F+L        L LSAG G+TPM SM RYL D     D+   H  R++ DI 
Sbjct: 65  RVLPPTGQFNLFDIPANKYLFLSAGCGITPMYSMSRYLTDTQINADIAVVHSARTQADII 124

Query: 429 CQAELDALAKQHAGLTLIYAL--TQPSPQWQGEQ-----GRLSLSH-IKRIPNLVSRQVF 480
            +  L+ +A +HA   L Y +        W  E+     GRLS  + +  +P+   R VF
Sbjct: 125 FKNTLETMAARHASFKLCYLVEGVTTDTVWHTEEAFHYVGRLSAQNLLSLVPDFAERIVF 184

Query: 481 VCGPDGFMQKAKNLLLKQGVAESAYHQEAFGT--------LQVAPREKKAVTLSFNGIQV 532
           +CGP+ +MQ  K +L +     +  + E+F T        ++ A  + +  T S  G  +
Sbjct: 185 LCGPELYMQAVKTILTELNFDMNKLYHESFATAVKEAQSHVKQAEIQSETPTTSSTGFML 244

Query: 533 SADNQK-------TLLEHAEDAGVRIPNSCRAGICGACKVKVKSGLVEQPKVPALMDHER 585
           S  ++K       TLL+  E  G+ I  +CR+G+CGACK KV  G  E      L   + 
Sbjct: 245 SIGDKKHLLTAEQTLLDGIEAEGLPIIAACRSGVCGACKCKVLQGETESTSYMTLTPTDI 304

Query: 586 SMGMALACCSVANTDL 601
             G  LAC +   +D+
Sbjct: 305 EAGYVLACSTRLKSDV 320