Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  238 bits (607), Expect = 5e-67
 Identities = 144/332 (43%), Positives = 205/332 (61%), Gaps = 4/332 (1%)

Query: 275 IFTVIALVISVFVLLFIVRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIG 334
           I  V+ LVI+V  LL +   +++PL  + D + ++A+GEGDLT+RL+  + +E  +LA  
Sbjct: 211 IAAVVLLVIAVVGLL-LANAILRPLHLMKDNLDDIAAGEGDLTRRLTITSQDELGQLAGS 269

Query: 335 FNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATT 394
           FN F + +   + Q   + +++       S   Q+S +AM  Q HE +Q+ATA++EM++ 
Sbjct: 270 FNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVATAINEMSSA 329

Query: 395 SSDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANI 454
           + +VA +AQGAA AA+  D+   +   VV  + + I  L   I ++   +  L+   A+I
Sbjct: 330 AQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVSLDSLQQDVASI 389

Query: 455 ETVLKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMI 514
            +VL VI  IA+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQQST EI+ MI
Sbjct: 390 VSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQEIQGMI 449

Query: 515 EKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQS 574
           ++LQSG +A   AM  S +       +A  A  +L+ +   I  I+ MN QIASAAEEQ+
Sbjct: 450 DRLQSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIGTINSMNAQIASAAEEQT 509

Query: 575 LVAEEINNNTVKIKDLSDQVAESADEANMSMQ 606
            VAEEIN +  +I    D V   ADE  +  Q
Sbjct: 510 AVAEEINRSVHQIAVAVDSV---ADETQLGAQ 538