Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  225 bits (573), Expect = 4e-63
 Identities = 133/327 (40%), Positives = 198/327 (60%), Gaps = 5/327 (1%)

Query: 279 IALVISVFVLLF---IVRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGF 335
           + L+ +   LLF   +   + KP+    DA + +A  +G+LT+ ++ +  +E  +L    
Sbjct: 190 LLLIATGLTLLFAWLLTNSITKPIANALDAAEEIA--KGNLTRPITVDGSDEAGRLLRAM 247

Query: 336 NTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTS 395
           +T  E L+  L +      ++   +E  +    +SA  +  Q +E+EQ ATA++EM +  
Sbjct: 248 STMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQAATAVNEMTSAV 307

Query: 396 SDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIE 455
            +VA NA   + A+K A  +A  G D+V +T  AI+ +SA + +    +  L   + +I 
Sbjct: 308 EEVARNAVSTSEASKNATTSAGDGRDLVQETVSAIERMSADVQSTAALIGNLADESRDIG 367

Query: 456 TVLKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIE 515
            VL VI  +ADQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQQST+EI  MI 
Sbjct: 368 KVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIG 427

Query: 516 KLQSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSL 575
            +QSG      +M +S + A S +N A+GA  +L+ I  AI +I++ N+ IASAAEEQ+ 
Sbjct: 428 SIQSGTEHAVDSMRNSTERAESTLNIARGAGMSLDTINTAIVEINERNLVIASAAEEQAQ 487

Query: 576 VAEEINNNTVKIKDLSDQVAESADEAN 602
           VA E++ N V I+DLS Q A  A++ +
Sbjct: 488 VAREVDRNLVNIRDLSVQSATGANQTS 514



 Score = 36.6 bits (83), Expect = 3e-06
 Identities = 57/267 (21%), Positives = 105/267 (39%), Gaps = 19/267 (7%)

Query: 360 SESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAG 419
           +E T +TL+    + R  ++    +    +++    S     AQ        A D  AA 
Sbjct: 51  NEFTQLTLRLRVLSYRLLVNREPDIQQKTYDLVEQRSQQIRAAQTTYEKLISASDERAAY 110

Query: 420 TDVVT------KTTKAIDTLSATIDAAVDDVKVLESAT--ANIETVLKVINDIADQTNLL 471
             +V       +  + + TLS   +  VD+++ L +    +N + +   I+ + +  NL 
Sbjct: 111 DQLVQLLGQYRQLEERMKTLSR--NNQVDELRALLNTELLSNSDAINAAIDRLVEINNLQ 168

Query: 472 ALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHS 531
           A   A+    A +    F  V   +      T      + N I K  + A   A  ++  
Sbjct: 169 A--EALNKGAAQQYSSAFNWVVTLLLIATGLTLLFAWLLTNSITKPIANALDAAEEIAKG 226

Query: 532 KDTAASAVNQAQGANEAL-------EKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNT 584
             T    V+ +  A   L       EK+R  +Q+IS    Q+ASAAEE + V +E     
Sbjct: 227 NLTRPITVDGSDEAGRLLRAMSTMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGL 286

Query: 585 VKIKDLSDQVAESADEANMSMQIQTEN 611
            +  +  +Q A + +E   +++    N
Sbjct: 287 TQQNNEIEQAATAVNEMTSAVEEVARN 313