Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  267 bits (682), Expect = 1e-75
 Identities = 199/644 (30%), Positives = 325/644 (50%), Gaps = 39/644 (6%)

Query: 8   VAASSVLLLATVALLSGSQYFKVR------DEIRSMVSDSVDEIVDGVSKTTAEV----- 56
           +A   V+L+A + +L+     K         EIR  + + + +  DG+S+          
Sbjct: 14  IACLPVILVAVLVVLNLRDAAKANFLDSSGREIRQ-IDNGMKQFFDGISQNVEFFAKDPR 72

Query: 57  INGRKSIAQYATSLIENNPEPDNVRTIIS--QPLIKN--TFLLVGFGLEKDGSNINNDPS 112
           +   K +  YA +     P P+  + ++   +   K+  T   +  G+E  G       S
Sbjct: 73  VIAAKGLKSYAGADAAQQPFPEINQQLLDIFERFAKSHPTTAYLSVGMEDGGY-----AS 127

Query: 113 WNPGP---TWDPRVRPWYKDAKNA-GKLVITAPYADSASGEILVSVATPVKDSATGQFLG 168
           W   P    +DPRVRPWYK A  A G  V T  Y  +     L+     V D A+G+ +G
Sbjct: 128 WPDDPKMANYDPRVRPWYKAAMAAPGTNVRTDAYYWAPDDVSLIGTVHTVAD-ASGKPIG 186

Query: 169 SIFYDVSLAELAELVNEVKLFDAGYVFIVSEDGTTIAHPKK-EFNGKPMSE----FLGES 223
            +  DVSL +L ELV  +KL ++GY+ +V  +G  +  P   + N KP+++    +   +
Sbjct: 187 VVGLDVSLKQLTELVKNIKLGESGYLMLVEANGNVLVDPADAKHNFKPLADLGPNYAELA 246

Query: 224 KINVDTHQVIINGKPYAVSFSDVEGEDW-YVGVVIDEEIAYAALDELRRSTLIFTVIALV 282
           K +    Q+ I+G PY  +    +G  W ++G++  +E+    + E    T +   IA V
Sbjct: 247 KSSDGVTQIEIDGVPYMANVVSSKGLGWRFIGLIKRDEV----MAEASSLTWLIAAIAAV 302

Query: 283 ISVFVLLF---IVRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFT 339
           ++V   L       V+++P+  + + +Q +A GEGDLT++L+    +E A LA  FN F 
Sbjct: 303 LAVVFALVGASFASVIVRPIRGVANGLQEIAEGEGDLTRKLTVQGKDETATLAGWFNQFL 362

Query: 340 ETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVA 399
             + + + +  +  +++   +  TS   Q   +A   Q   +E ++TA +EM  T+++VA
Sbjct: 363 GMIAQLMQRIGSASSDLQTAAADTSHVAQNMNDAAGRQRQAVELVSTAFNEMVATANEVA 422

Query: 400 NNAQGAASAAKVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLK 459
            +   AAS+A         G   + + T ++  LS  +  +   ++ LE  + NI T+L 
Sbjct: 423 RSCSQAASSADEGYRDVHDGQHHIGEATGSVMKLSDDLQKSTQTMQALEQDSKNINTILD 482

Query: 460 VINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQS 519
            I  IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA+RT  ST EI +++  L  
Sbjct: 483 TIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTGEIDSLLGNLAR 542

Query: 520 GANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEE 579
               V   M  S   + ++V + Q A ++ +KIR ++  I D N QIA+AAEEQ  VAE+
Sbjct: 543 RTQEVTQQMQSSLQVSQTSVERIQQARDSFDKIRNSVDSIRDQNTQIATAAEEQHQVAED 602

Query: 580 INNNTVKIKDLSDQVAESADEANMSMQIQTENIREQDAILNKFK 623
           IN +  +I   +  V E A  A       T+   +   ++ +F+
Sbjct: 603 INRHIAQIHADAQLVEEFAHSAQTGSGRLTDISGQLKGLVGRFR 646