Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  251 bits (640), Expect = 8e-71
 Identities = 178/546 (32%), Positives = 286/546 (52%), Gaps = 28/546 (5%)

Query: 95  LVGFGLEKDGSNINNDPSWNPGP---TWDPRVRPWYKDAK-NAGKLVITA---PYADSAS 147
           ++  GLE DGS       W   P    +DPR RPWYK A  + GK V T    P  D   
Sbjct: 77  ILSIGLE-DGSYAK----WPDDPQLANYDPRSRPWYKAAMASPGKTVRTPAFYPAYDYGK 131

Query: 148 GEILVSVATPVKDSATGQFLGSIFYDVSLAELAELVNEVKLFDAGYVFIVSEDGTTIAHP 207
            +  +        ++ G   G +  +VSL  L ELV  +KL ++GYV ++ EDG  +  P
Sbjct: 132 EDAALVGTARAMITSDGIVKGVLAVNVSLKNLTELVKSIKLGESGYVMLI-EDGIVLVDP 190

Query: 208 KKEFNG-KPMSEFLGESKINVDT-----HQVIINGKPYAVSFSDVEGEDW-YVGVVIDEE 260
           +   +  KP+ + LG +   + T      +V +NG PY  +        W Y+G++   E
Sbjct: 191 RDTTHSFKPLKD-LGAAYAKLATIPQGSTEVELNGIPYMANVWTSPDLGWRYIGLIERSE 249

Query: 261 IAYAALDELRRSTLIFTVIALVISVFVLLFIVRVLMKPLDTLNDAIQNVASGEGDLTQRL 320
           +  AA      +TLI   + ++ ++  + F  + ++KP+  ++  +Q++A GEGDL + L
Sbjct: 250 VMSAATRMTYLTTLIVGGLTVIFALVAVAFS-KSIVKPISQVSTGLQSIAQGEGDLRREL 308

Query: 321 STNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAMRSQLHE 380
               ++E A+LA  FN F   +++ +    A  + +   S   S       EA   Q   
Sbjct: 309 EFQGNDETAELAGWFNKFLSAIRQLIQHIGAASSNLQNASRVNSEVANNMNEAAGRQREA 368

Query: 381 LEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAIDTLSATIDAA 440
           +E ++TA +EM  T+++VA +  GAA +A+      A G   +  TT  ++ L   +  +
Sbjct: 369 VELVSTAFNEMVATANEVARSCSGAAESAENGHRRVAEGKQQIEITTDNVNRLGRRLTES 428

Query: 441 VDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLA 500
              +  LE+ + +I  +L  I  IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA
Sbjct: 429 SQSMTELEAGSRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALA 488

Query: 501 QRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQIS 560
           +RT  ST EI  ++  L S    V   M    + + ++V+  +   ++ E I+L++ +I 
Sbjct: 489 KRTSDSTGEIEQLLGALGSKTQEVMGKMGSCLELSHASVSSIESTRDSFEGIQLSVNEIR 548

Query: 561 DMNIQIASAAEEQSLVAEEINNNTVKIKD---LSDQVAESADEANMSMQIQTENIREQDA 617
           D N+QI++AAEEQ  VAEEIN +  +I D   L + +A SA + +  +   ++   E + 
Sbjct: 549 DQNLQISAAAEEQHSVAEEINRHIQQIYDEARLVESLANSAQDDSGKLSSLSD---ELNG 605

Query: 618 ILNKFK 623
           ++ +FK
Sbjct: 606 LVGRFK 611