Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

 Score =  224 bits (570), Expect = 1e-62
 Identities = 131/325 (40%), Positives = 196/325 (60%), Gaps = 2/325 (0%)

Query: 278 VIALVISVFVLLFIVRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNT 337
           VIA  +++     +   + KP+     A + +A  EG+LT+ ++ + ++E  +L      
Sbjct: 192 VIATGLTLLFAWLLTNSITKPIANALSAAEEIA--EGNLTRPITVDGEDEAGRLLAAMAK 249

Query: 338 FTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSD 397
             E L+  L +      ++   +E  +    +SA  +  Q +E+EQ ATA++EM +   +
Sbjct: 250 MQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQAATAVNEMTSAVEE 309

Query: 398 VANNAQGAASAAKVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETV 457
           VA NA   + A+K A  +A  G D+V +T  AI+ +SA + +    +  L + + +I  V
Sbjct: 310 VARNAVSTSEASKNATTSAGDGRDLVQETVSAIERMSADVQSTATLIGDLANESRDIGKV 369

Query: 458 LKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKL 517
           L VI  +ADQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQQST+EI  MI  +
Sbjct: 370 LDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSI 429

Query: 518 QSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVA 577
           QSG      +M +S + A S +N A+GA  +L+ I  AI +I++ N+ IASAAEEQ+ VA
Sbjct: 430 QSGTEHAVDSMRNSTERAESTLNIARGAGMSLDTINSAIVEINERNLVIASAAEEQAQVA 489

Query: 578 EEINNNTVKIKDLSDQVAESADEAN 602
            E++ N V I+DLS Q A  A++ +
Sbjct: 490 REVDRNLVNIRDLSVQSATGANQTS 514



 Score = 33.1 bits (74), Expect = 3e-05
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 550 EKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQIQT 609
           EK+R  +Q+IS    Q+ASAAEE + V +E      +  +  +Q A + +E   +++   
Sbjct: 252 EKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQAATAVNEMTSAVEEVA 311

Query: 610 EN 611
            N
Sbjct: 312 RN 313