Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  361 bits (926), Expect = e-104
 Identities = 223/640 (34%), Positives = 355/640 (55%), Gaps = 31/640 (4%)

Query: 1   MKFSHKIVAASSVLLLATVALLSGSQYFKVRDEIRSMVSDSVDEIVDGVSKTTAEVINGR 60
           +KFSHKI+ A+S++++AT +L +    +  R+ IR  ++  +DE+ D  +      ++GR
Sbjct: 5   LKFSHKILLAASLIVIATFSLFTLFNDYLQRNAIRDNLNSYLDEMGDVTAHNIQNWLSGR 64

Query: 61  KSIAQYATSLIENNPEPDNVRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWD 120
             + + A   I ++     V  ++ Q  + +TF+    G  +DGS +       P   +D
Sbjct: 65  ILLVESAAQSIGSDDAEARVAELLEQKALASTFMFSYLG-GQDGSFLMRPAEEMPAD-YD 122

Query: 121 PRVRPWYKDAKNAGKLVITAPYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAELA 180
           PR RPWYKDA  AG   +T PY D+ASGE+++S+ATP + +  G+ +G +  D+ L  L 
Sbjct: 123 PRARPWYKDAIAAGGSTLTEPYVDAASGELVISIATPAQQN--GRNIGVVGGDLGLKVLV 180

Query: 181 ELVNEVKLFDAGYVFIVSEDGTTIAHPKKEFNGKPMSEFLGE------SKINVDTHQVII 234
           E++N +     G+ F+VS DG  + HP    +G  + + LGE        ++ +  +  +
Sbjct: 181 EIINALDFNGMGHAFLVSGDGKILVHP----DGSKVMKSLGELFPGHTPSLDANYSEAEL 236

Query: 235 NGKPYAVSFSDVEG---EDWYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFI 291
           +G+   +SFS V+G     WYVG+ +D+  AYAAL   R S ++  + A+ + + +L  +
Sbjct: 237 DGQTRILSFSRVQGLPSVSWYVGISLDKAKAYAALASFRTSAVVAALTAVGVILLLLGML 296

Query: 292 VRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLI---- 347
           +RVLM+PL  +  A+ N+A GEGDLT+RL+  + +EF +LA  FN F E +   +     
Sbjct: 297 MRVLMRPLTDMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREVSS 356

Query: 348 ---QSKAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQG 404
              Q   + A +L  S S+     + A    S       +A A++E+   + ++A NA  
Sbjct: 357 ATQQVNEVAARVLAASNSSMANSDEQASRTNS-------VAAAINELGAAAQEIARNAAD 409

Query: 405 AASAAKVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDI 464
           A+  A  A   A  G  VV +   A+  LSA I A+   ++ L + T +I  +L+VI  I
Sbjct: 410 ASQQASGARHQAEDGRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGI 469

Query: 465 ADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAV 524
           ++QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ S  EI+ MIE+LQ GA A 
Sbjct: 470 SEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGAS 529

Query: 525 AVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNT 584
              M+ S+  + S+V+ A  A E L ++   I +I  MN  +A+A EEQ+ V E +N + 
Sbjct: 530 VQTMTESQRQSESSVSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDI 589

Query: 585 VKIKDLSDQVAESADEANMSMQIQTENIREQDAILNKFKV 624
            +I  L+ Q  E+      +     +  R    +++ F++
Sbjct: 590 TEINTLNQQGVENLQSTLRACGDLDQQARRLKQLVDSFRI 629