Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  282 bits (721), Expect = 4e-80
 Identities = 192/511 (37%), Positives = 283/511 (55%), Gaps = 28/511 (5%)

Query: 140 APYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAELAELVNEV--KLFD-AGYVFI 196
           APY  +   ++L S   P+     G+F G +  D+ +  + +L++    +L+  AG + +
Sbjct: 201 APYEMNGQTQLLSSFNAPI--IIDGKFHGIVGADIGVDFMQQLLSSANSQLYGGAGQIAL 258

Query: 197 VSEDGTTIAHPK-KEFNGKPMSEFLGESKINV-------DTHQVIINGKPYAVSFSDVE- 247
           +S +G   A+ + +   GKP ++ L   +  +        TH  I + +     F     
Sbjct: 259 ISNNGRLAAYSRDRNLLGKPAAQLLDADEQALVKQLPAGQTHYRIDHARGRVALFLPFSF 318

Query: 248 -GED--WYVGVVIDEEIAYAALDEL--------RRSTLIFTVIALVISVFVLL---FIVR 293
            G D  W + + +        LD+L        R +     VI ++I+   LL    I R
Sbjct: 319 PGTDARWVLMLELPTAEVMKELDQLMVALGEESRSNLAAMLVIGMLIAFAGLLAIWLISR 378

Query: 294 VLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIG 353
            + +PL  +   + N++ GEGDLTQRL+ ++  E  ++A GFN F   LQ  + +  +  
Sbjct: 379 RITRPLRDMVVMLDNISQGEGDLTQRLNIDSRNELGQIAAGFNAFLARLQGMISEVVSSV 438

Query: 354 AEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVAD 413
            ++   SE T+    ++ + +++QL E+E +ATA+HEM  T+ DVA NA  AA AA  AD
Sbjct: 439 QKVSDASEHTADIAIRTDKGVQTQLAEIELVATAVHEMTATAQDVARNATQAAEAANNAD 498

Query: 414 DAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLAL 473
            AA  G  +V  T   I  L++ I  AVD V+ L   + NI+ +L  I  IA+QTNLLAL
Sbjct: 499 RAANQGRHIVQDTGATIAELASEIGRAVDVVQTLARDSENIDAILVTIRSIAEQTNLLAL 558

Query: 474 NAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKD 533
           NAAIEAARAGE GRGFAVVADEVR LAQ+TQQ+T EI+ MI++LQ G   V   M  S++
Sbjct: 559 NAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATGEIQQMIQQLQGGTRDVVQVMEQSQN 618

Query: 534 TAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQ 593
               +V QA  A EAL+ I  A+  I+DMN QIASAAEEQS VAE+IN N   I  ++ Q
Sbjct: 619 RTRRSVEQADAAAEALQAITQAVSLINDMNNQIASAAEEQSAVAEDINRNVTNIGQVAQQ 678

Query: 594 VAESADEANMSMQIQTENIREQDAILNKFKV 624
           VA  ADEA+ +    T    +Q  ++N+F+V
Sbjct: 679 VAAGADEASQASAGLTRLAEQQRRLINQFRV 709