Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  221 bits (563), Expect = 6e-62
 Identities = 139/374 (37%), Positives = 213/374 (56%)

Query: 251 WYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFIVRVLMKPLDTLNDAIQNVA 310
           W VG  I  +   A   E     L+  ++     + +LL I R + +PL     A +N+A
Sbjct: 181 WIVGTGIYVDDIAAQKQEFTWQYLLVFLLVWGPVMALLLMISRSVTEPLQRTLMAFKNIA 240

Query: 311 SGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQS 370
            GE +LT RL     +E +++++ FN F   +Q  +I  +       + S S S    Q+
Sbjct: 241 EGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQA 300

Query: 371 AEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAI 430
           A A  S   E + +A A+++M+ T+S+VA NAQ AA +AK AD  A +   VVT     +
Sbjct: 301 AHATNSMQQETQSVAAAINQMSATASEVAANAQLAAKSAKNADSQADSTNLVVTHAMGNV 360

Query: 431 DTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEAARAGESGRGFA 490
             LS+ ++   +  K L+ ++  I  +L VI  IA+QTNLLALNAAIEAARAGE+GRGFA
Sbjct: 361 RQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRGFA 420

Query: 491 VVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALE 550
           VVADEVRTLA RTQQST EI  +IE ++   + V  +++ ++  + + V++     +AL 
Sbjct: 421 VVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVMDALG 480

Query: 551 KIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQIQTE 610
            I+ AI QI+DMN+QIA+A +EQS V  E+N N  +I ++S +    ++    +     E
Sbjct: 481 LIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGHTSDRIAE 540

Query: 611 NIREQDAILNKFKV 624
           + R+   ++  FKV
Sbjct: 541 DSRQMAQLIAVFKV 554