Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  222 bits (565), Expect = 4e-62
 Identities = 136/374 (36%), Positives = 210/374 (56%)

Query: 251 WYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFIVRVLMKPLDTLNDAIQNVA 310
           W VG  I  +     +       L+  +   +  + +L  I R +  P+     A +N+A
Sbjct: 175 WIVGTGIYVDDIQEEMQAFIYKYLLICIAVWLPVILILGVISRSISAPMADTIAAFENIA 234

Query: 311 SGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQS 370
            GEGDLT RL  +  +E  ++A  FN F   +Q  +    A        +E  +    Q+
Sbjct: 235 RGEGDLTLRLEESGRDELKQVAASFNEFVAKIQALVNSVSASVTHSRELAEGLADISAQA 294

Query: 371 AEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAI 430
           +    +   E + +ATA++EM+  SS+VA+NAQ AA +A  AD  A     VV      I
Sbjct: 295 SMVTANMQAETQSVATAINEMSMASSEVASNAQLAADSAGSADGEADDTVAVVDGAVAKI 354

Query: 431 DTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEAARAGESGRGFA 490
             LS  ++   D+ + L+ ++  I  +L VI  IA+QTNLLALNAAIEAARAGE+GRGFA
Sbjct: 355 KGLSNELEVTADEAQALQISSGKIGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRGFA 414

Query: 491 VVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALE 550
           VVADEVRTLA RTQ+ST EI  +IE +++  ++V  +++ +K  +   V +     EAL+
Sbjct: 415 VVADEVRTLASRTQESTQEINAIIEAIRASVDSVNASVARAKAQSEQTVGETSQVVEALQ 474

Query: 551 KIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQIQTE 610
            I+ +I+QISDMNIQIA+A EEQS V  E+N N  +I D+S +  + ++E   + +    
Sbjct: 475 TIKSSIRQISDMNIQIATATEEQSAVIAELNMNVTRINDISLENQQKSEEIGSTSEQIKS 534

Query: 611 NIREQDAILNKFKV 624
              + +++++ FK+
Sbjct: 535 GSADLESLISTFKL 548