Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  269 bits (688), Expect = 2e-76
 Identities = 169/403 (41%), Positives = 232/403 (57%), Gaps = 20/403 (4%)

Query: 234 INGKPYAV---SFSDVEGEDWYV-GVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLL 289
           +NGK +A+      D  G+ + V  + +D   +  A+ ++R   ++  VIAL+I   +  
Sbjct: 240 LNGKSFALYRHGIKDYSGKTFGVLDIALDRSHSEQAMSDIRLKLIMIGVIALLIGTAIAW 299

Query: 290 FIVRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQS 349
           FI + + +P+    DA+ ++A GEGDLT+R+   + +E A+LA  FN F E +   + Q 
Sbjct: 300 FIAKSITRPIAETTDALNDIAEGEGDLTRRIEVKSKDEMAQLAQAFNRFAEKIHATVAQV 359

Query: 350 KAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAA 409
               + +   +E  S    ++ +    Q  E EQ+ATAM+EMA T  +VA+NA  AA AA
Sbjct: 360 SDSTSLLATSAEEMSAITHETQQMANRQHLETEQVATAMNEMAATVQEVAHNATDAADAA 419

Query: 410 KVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTN 469
             A ++   G  +V K    I  L+  I  A + +  LE  T  I++VL VI +IADQTN
Sbjct: 420 THASESTEQGKLLVEKVISTISLLADEIAQAANAINELERNTTQIDSVLVVIRNIADQTN 479

Query: 470 LLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMS 529
           LLALNAAIEAARAGE GRGFAVVADEVRTLA RTQ STTEI+ MIE LQ  A A   +M+
Sbjct: 480 LLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTTEIQQMIETLQQSAKATVSSMN 539

Query: 530 HSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKD 589
            S  T  S V+    A  ALE I  A+  IS MNIQIASAA EQ  V+ EIN N   I D
Sbjct: 540 TSTATTQSCVSLVHEAGSALEAITQAVSTISQMNIQIASAANEQCAVSAEINKNVNNIND 599

Query: 590 LSDQVAESA-------DE-ANMSMQIQTENIREQDAILNKFKV 624
           ++    ESA       DE A +SM++ T        +L++FK+
Sbjct: 600 IATNATESAMQTARAGDELAQLSMRLTT--------LLSQFKI 634