Pairwise Alignments

Query, 259 a.a., hemin import ATP-binding protein HmuV from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., iron-compound ABC transporter, ATP-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  126 bits (316), Expect = 6e-34
 Identities = 85/259 (32%), Positives = 134/259 (51%), Gaps = 16/259 (6%)

Query: 4   IAIQGRDLCVTYGSRQVLDHVDITLRCGEVAALLGPNGAGKSTLLKLLCGEMSGA-GKLD 62
           +A+    L  T   + +L  V+  L+ GE+  L+GPNGAGKS+LL+ L   +    G++ 
Sbjct: 1   MALNVSQLSWTIEGKTILSGVNFALQRGEMLGLIGPNGAGKSSLLRCLYRFIRPTQGQIS 60

Query: 63  YFGVPASQWPAEKLANHLGILPQQSSLTFPFTAQEVVELGAIPL-----NLPRKEVERVA 117
            F    SQ   +  A  + ++ Q +   F  T +++V +G  P      +    + +++ 
Sbjct: 61  LFSQDISQLSPKAFACKVAVVQQDTPHYFDMTTEQLVAMGLTPHKGMFDSHSSGDSDKII 120

Query: 118 RHYMLKTDVLHLAASLYPSLSGGEKQRLHLARVLTQLHQAGQQRILMLDEPTSALDLAHQ 177
           +  + K  + H     Y  LSGGEKQR  +AR + Q     Q  +L+LDEPT+ LD+ +Q
Sbjct: 121 KA-LEKVGLSHKLHQQYERLSGGEKQRALIARAIVQ-----QPLLLILDEPTNHLDVRYQ 174

Query: 178 HNTLQLARQLADEEQCAVVVVLHDLNLAAQYSDRLILLHQGKIVCDAAPWQALTAERIEQ 237
              L+L R L      +V+  +HDLNLA+   D L+LL  G++     P + LT ERI Q
Sbjct: 175 IQILELVRSLG----ISVIASIHDLNLASALCDSLLLLDNGQVSAMGTPTEVLTEERIAQ 230

Query: 238 VYGYQALVAAHPTRDFPMV 256
           V+G  A V  HP    P++
Sbjct: 231 VFGVCAQVMPHPQHANPLI 249