Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  196 bits (498), Expect = 7e-55
 Identities = 110/326 (33%), Positives = 188/326 (57%), Gaps = 5/326 (1%)

Query: 14  LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGA 73
           LTL +  + L  + +GP   ++ D +   LF  +  +  + +V+ DIRLP  L+ + VGA
Sbjct: 29  LTLLLICSVLLDLALGPARYSL-DEVLGALFSPDSASPQVRVVMWDIRLPVALMAVAVGA 87

Query: 74  ILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLVLPIAAF 133
            L+L G  MQ +  NPLA P  +G+S+ AS GAA+ +      V+  P     ++P+ AF
Sbjct: 88  ALSLAGAQMQTILNNPLASPFTLGISAAASFGAAMGLAF---GVALFPLAAQYMVPVNAF 144

Query: 134 IGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLTLWSM 193
           I   L+ +L++ L   +  T+ TI+LL G+A+     A +  + + A++Q +  +  W+M
Sbjct: 145 IMAMLSALLIHFLSLRRGVTAETIVLL-GIALVFTFNALLALVQFFATEQAVAAVVFWTM 203

Query: 194 GSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREMILLS 253
           GS+  AT   + +  + +++    F  R+ AL AL LG+ +A   G+ V+ L+ + +++ 
Sbjct: 204 GSLTKATWPKLGVICLVILVTLPIFARRAWALTALRLGDDKAASFGINVRSLRFQTLIMV 263

Query: 254 AVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLADMVARVAVA 313
           ++     V+  G IGF+GLV PHI RML+G D R  +P S L GAL+L+ + ++++  + 
Sbjct: 264 SLLASFPVAFVGTIGFIGLVGPHIARMLIGEDQRFFLPASLLTGALILSASSVISKTLIP 323

Query: 314 PAELPIGIVTALVGAPFFLYLLFQQK 339
            A  PIG+VT+L+G PFF+ L+   K
Sbjct: 324 GAIFPIGVVTSLIGVPFFISLILGGK 349