Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  177 bits (449), Expect = 4e-49
 Identities = 113/336 (33%), Positives = 179/336 (53%), Gaps = 14/336 (4%)

Query: 9   VTISCLTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLC 68
           +++  L +AV    LY++TVG  +++++   Q+LL   EQ+ + +  ++ ++RLPR LL 
Sbjct: 25  ISVLLLMVAVVALALYALTVGSYSLSVAQVWQALL-APEQVNSTMRNLLWELRLPRVLLA 83

Query: 69  LLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLVL 128
           +L GA ++L G  MQ L RNPLA PG++GV SGAS+   L IVL         W   L L
Sbjct: 84  VLAGAAMSLAGLLMQSLTRNPLAAPGLVGVESGASVTMLLIIVL---------WPALLPL 134

Query: 129 ---PIAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQML 185
              P+AA  GG      V  L   + G S   ++L GV ++A+  A    L    +   +
Sbjct: 135 EFYPLAALAGGLAVAFFVALLSWRQ-GISPLRLILVGVGLTAMLSAVADLLITYGNIDQV 193

Query: 186 RDLTLWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKL 245
               +W  GS+  A+   +    + L++      +    LN L LGE  A   G+ V  +
Sbjct: 194 ESALMWLGGSLHRASWPQVHSLGLWLLVAGVPLLFCHRQLNLLQLGEKVALSRGLNVTWI 253

Query: 246 KREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLAD 305
              ++L S +    AV+  G + FVGLV PH+ R + G  H  L+P+S L+GAL++   D
Sbjct: 254 MVSLLLCSVMLTAAAVANVGTMTFVGLVAPHLARQMAGDRHGALIPLSALVGALLVLAGD 313

Query: 306 MVARVAVAPAELPIGIVTALVGAPFFLYLLFQQKGR 341
            + R  + P +LP G+V A++GAP+ + LL +Q+ R
Sbjct: 314 TLGRGLLPPLQLPAGLVVAIIGAPYLIVLLARQRSR 349