Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  177 bits (450), Expect = 3e-49
 Identities = 119/337 (35%), Positives = 190/337 (56%), Gaps = 17/337 (5%)

Query: 2   LRRFPFAVTISCLTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIR 61
           +RR+  A  I    L +F+  L++++    +I   D+   L+ +  +  N  ++V   +R
Sbjct: 1   MRRWLMAGVIIAACLGLFWVSLFALS--SFSIRQVDAWNGLITQGREGGNIAYIVAQ-LR 57

Query: 62  LPRTLLCLLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLP 121
           +PR L   LVGA L + G  MQG+ RN LA P + GV++GA+LG AL     S  + +LP
Sbjct: 58  VPRALCAALVGACLGVAGALMQGITRNRLASPSLFGVTAGAALGLAL----FSTGLVALP 113

Query: 122 WVNSLVLPIAAFIGGALTTVLVYRLGTS-KFGTSVTIMLLAGVAISALAGAGIGYLNYLA 180
           +    +L     +GGAL  + V+ LG +    T+   ++LAGVA++AL  A +  L  + 
Sbjct: 114 FPGGALLMTC--LGGALAWITVFSLGGAWSPATAQGRLVLAGVAVAALCAA-LTRLTVIL 170

Query: 181 SDQMLRDLTLWSMGSVAGATTSSILL---CSVTLIMLFAYFHWRSMALNALLLGEAEARH 237
            +   + +  W  GS+A    + + L   C++  ++L      R   LN + LGE  AR 
Sbjct: 171 VEAQAQSVLNWLAGSLANVGAAQLQLLWPCTLIGVVLAVACAPR---LNLINLGEDAARS 227

Query: 238 LGVPVQKLKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLG 297
           LGV +  L+  + ++S + VG +V A G IGFVGL+ P+I R  +G D+R L+P+S  LG
Sbjct: 228 LGVRIGALRMLVFVVSLLLVGASVCAVGPIGFVGLIAPNIARQWLGNDYRWLIPISAGLG 287

Query: 298 ALMLTLADMVARVAVAPAELPIGIVTALVGAPFFLYL 334
           A ++  +D+++R    P E P G+VTAL+GAPFFL+L
Sbjct: 288 AAIVLASDLISRAVAFPVETPAGVVTALIGAPFFLFL 324