Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., transport system permease protein (RefSeq) from Shewanella loihica PV-4

 Score =  181 bits (460), Expect = 2e-50
 Identities = 114/325 (35%), Positives = 182/325 (56%), Gaps = 7/325 (2%)

Query: 13  CLTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLT--NAIHLVIHDIRLPRTLLCLL 70
           CL L      + +++ G   I +++ ++ LL +            ++ ++RLPR LL  +
Sbjct: 22  CLGLLTLATPVLAVSFGAAQIGVAEVLEVLLAKLSGADPGGVTARILIELRLPRILLAFI 81

Query: 71  VGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLVLPI 130
            G  LAL G  +Q + RNPLA+P + G+SSGASLGA + I LL  V  +L    S+ LP+
Sbjct: 82  AGFGLALAGAVLQTVTRNPLADPYLFGISSGASLGAVVVITLLGGVGGALA---SVGLPL 138

Query: 131 AAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLTL 190
            AFIG +L  ++V  L      T +  MLL+GVAIS L GA    + Y +  Q    +  
Sbjct: 139 GAFIGASLAVLMVLALCGRDLNTQIERMLLSGVAISFLFGALASLMLYFSGPQSAASVLF 198

Query: 191 WSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREMI 250
           WS+GS A A+   + L  + ++   A        + A+  G+  A  LG+ VQ+L+   +
Sbjct: 199 WSLGSFAKASWQMLWLPWLLVLAASAILLLLKRQILAIQAGDETAHTLGIRVQRLRLVSL 258

Query: 251 LLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLADMVARV 310
           LL ++   V V+  G IGFVGL+VPH+ R+L+    R  + ++ L+G L +   D++AR 
Sbjct: 259 LLCSLITAVLVANCGGIGFVGLMVPHMVRLLL--PGRFALLLTALVGGLFMIWVDVLARC 316

Query: 311 AVAPAELPIGIVTALVGAPFFLYLL 335
            ++  ELP+GI+TA++G+ FFL++L
Sbjct: 317 LLSYQELPVGIITAVIGSLFFLFIL 341