Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

 Score =  180 bits (456), Expect = 5e-50
 Identities = 113/319 (35%), Positives = 175/319 (54%), Gaps = 22/319 (6%)

Query: 20  FAG--LYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGAILAL 77
           FAG  L+S+ VG           SL+F +    N    +  DIRLPR +   L GA LAL
Sbjct: 11  FAGVFLFSLFVGRYMFD-----PSLIFTNSLANN----IFFDIRLPRAIAVSLAGASLAL 61

Query: 78  CGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLVLPIAAFIGGA 137
            G + Q +F+N LA P I+GV+SG++ GA++AI+  +         N  ++  +AFI G 
Sbjct: 62  AGVSFQNIFKNYLAGPNILGVTSGSAFGASIAILFFA--------YNPYLVQFSAFIFGV 113

Query: 138 LTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASD-QMLRDLTLWSMGSV 196
           +   + Y+L +S   + +  ++L+G+AISA   A IG + Y+A   + L  +  W +GS 
Sbjct: 114 IAVYIAYKL-SSLLKSGIVGLILSGMAISAFFSAMIGLIKYVADPYEKLPTIVFWLLGSF 172

Query: 197 AGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREMILLSAVG 256
            G     + +  + +++            N L  G+  A+ LGV  +KLK   I L+ + 
Sbjct: 173 VGLRWVDLGISVIPMLIGIIGLVMLKWVFNILATGDENAKSLGVDSKKLKNITIFLATLA 232

Query: 257 VGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLADMVARVAVAPAE 316
              + S AGMI +VG+V PHI R+LVG D+R LVP S  +GA +L L D +AR  + P+E
Sbjct: 233 ASASTSLAGMIQWVGVVSPHIARLLVGVDNRKLVPASAFVGATLLLLCDTLAR-TLTPSE 291

Query: 317 LPIGIVTALVGAPFFLYLL 335
           +PI I+T+ +GAP  + +L
Sbjct: 292 IPISIITSFIGAPILIIIL 310