Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis JJ

 Score =  203 bits (517), Expect = 5e-57
 Identities = 121/326 (37%), Positives = 182/326 (55%), Gaps = 8/326 (2%)

Query: 14  LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGA 73
           L +A+    +Y++  G   ++IS  I SLL   +  +N   LVI +IRLPR    +L G 
Sbjct: 22  LIIALIIISIYALCTGDFQLSISQIINSLLGSGDASSN---LVIWNIRLPRIFAAILCGI 78

Query: 74  ILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLL----SDVVSSLPWVNSLVLP 129
            L++ G  MQ + RNPLA P  +G+S GA  GA +AI+ L    ++    +   N   + 
Sbjct: 79  GLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAESTGHIAINNPYSIT 138

Query: 130 IAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLT 189
           I AF+G  L    V  L   K G S   M+LAGVAIS+L  A    + Y A D  L  + 
Sbjct: 139 IFAFLGSLLGVCAVLVLAKLK-GLSPEAMVLAGVAISSLFTAATTLIQYFADDMQLAAMV 197

Query: 190 LWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREM 249
            WS G +       + + ++   +   YF  +    NAL  GE  A+ LGV   K++   
Sbjct: 198 YWSFGDLGRPLWPEVKIMALVAFVSLIYFIHKRWDYNALESGEETAKSLGVNTDKIRLSG 257

Query: 250 ILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLADMVAR 309
           +L++++   V V+  G+IGFVGL+ PHI R+ VG D+R L+P+ ++ GA+++ LAD +AR
Sbjct: 258 MLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIFGAVLVLLADTIAR 317

Query: 310 VAVAPAELPIGIVTALVGAPFFLYLL 335
             ++P  LP+GI+T+ +GAP FLYLL
Sbjct: 318 TIISPIILPVGILTSFLGAPMFLYLL 343