Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., iron ABC transporter permease from Methanococcus maripaludis JJ

 Score =  179 bits (455), Expect = 6e-50
 Identities = 106/296 (35%), Positives = 166/296 (56%), Gaps = 15/296 (5%)

Query: 41  SLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGAILALCGTAMQGLFRNPLAEPGIIGVSS 100
           SL+F +    N    +  DIRLPR +   L GA LAL G + Q +F+N LA P I+GV+S
Sbjct: 5   SLIFTNSLANN----IFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVTS 60

Query: 101 GASLGAALAIVLLSDVVSSLPWVNSLVLPIAAFIGGALTTVLVYRLGTSKFGTSVTIMLL 160
           G++ GA++AI+  +         N  ++  +AFI G +   + Y+L +S   + +  ++L
Sbjct: 61  GSAFGASIAILFFA--------YNPYLVQFSAFIFGVIAVYIAYKL-SSLLKSGIVGLIL 111

Query: 161 AGVAISALAGAGIGYLNYLASD-QMLRDLTLWSMGSVAGATTSSILLCSVTLIMLFAYFH 219
           +G+AISA   A IG + Y+A   + L  +  W +GS  G     + +  + +++      
Sbjct: 112 SGMAISAFFSAMIGLIKYVADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLV 171

Query: 220 WRSMALNALLLGEAEARHLGVPVQKLKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGR 279
                 N L  G+  A+ LGV  +KLK   I L+ +    + S AGMI +VG+V PHI R
Sbjct: 172 MLKWVFNILATGDENAKSLGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIAR 231

Query: 280 MLVGPDHRNLVPVSTLLGALMLTLADMVARVAVAPAELPIGIVTALVGAPFFLYLL 335
           +LVG D+R LVP S  +GA +L L D +AR  + P+E+PI I+T+ +GAP  + +L
Sbjct: 232 LLVGVDNRKLVPASAFVGATLLLLCDTLAR-TLTPSEIPISIITSFIGAPILIIIL 286