Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., hemin ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  358 bits (918), Expect = e-103
 Identities = 185/334 (55%), Positives = 252/334 (75%), Gaps = 12/334 (3%)

Query: 14  LTLAVFFAGLYSITVGPMNITISDSIQSLL-FRSEQLTNAI----HLVIHDIRLPRTLLC 68
           + + +  + + S++VGP++I++ DS+ ++  + ++Q    I     LV+ ++RLPRTLL 
Sbjct: 11  MMMLLILSSILSVSVGPVSISLMDSLSAVFNWATQQSIGNIAPHEQLVVSNVRLPRTLLA 70

Query: 69  LLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLVL 128
           L VGAILA CG  MQGLFRNPLA+PGIIGVSSGA+LGAA+ IVL  DV        SL++
Sbjct: 71  LTVGAILAQCGAVMQGLFRNPLADPGIIGVSSGAALGAAICIVLFPDV-------GSLMI 123

Query: 129 PIAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDL 188
            + AF+ G  TT++VYRL ++  GTSV ++LL+GVAI+ALAGAGIG L YLA+D  LRDL
Sbjct: 124 SLGAFLCGLATTLIVYRLASNGLGTSVVLLLLSGVAIAALAGAGIGVLTYLANDMALRDL 183

Query: 189 TLWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKRE 248
           TLW MGS+AGA    + LC + L++L   F   +MALNALLLGEAEARHLG+ V +LK  
Sbjct: 184 TLWQMGSIAGAQWQYVGLCLLVLVLLSWRFQRDAMALNALLLGEAEARHLGINVDRLKLR 243

Query: 249 MILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLADMVA 308
           +ILL A+GVGV+V+A G+IGF+GLVVPH+ RM++GPDH+ L+P+S LLGA +L LAD+ A
Sbjct: 244 LILLCALGVGVSVAATGIIGFIGLVVPHLVRMILGPDHKRLLPMSALLGAALLALADIGA 303

Query: 309 RVAVAPAELPIGIVTALVGAPFFLYLLFQQKGRI 342
           R  + PAELP+ +VTAL+GAPFF++LL QQ+ ++
Sbjct: 304 RTFLPPAELPVSLVTALIGAPFFIFLLLQQRSKL 337