Pairwise Alignments

Query, 277 a.a., hemin ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 56.6 bits (135), Expect = 5e-13
 Identities = 42/196 (21%), Positives = 97/196 (49%), Gaps = 3/196 (1%)

Query: 23  ERIVSAGSAVTELILALGAEQQLVAVDVTSEVPSSLN-LPTVGYHRRLAAEGLLTLEPTH 81
           +RI++      E++ A+GA + +VA    ++ P +   +P++G +  +  E +L L P  
Sbjct: 6   KRIIALSPHAVEMLYAIGAGEAIVAATDYADYPEAAKKIPSIGGYYGIQIERVLELNPDL 65

Query: 82  LIGSDEMGPDTALQQLRSSGIQVNVINSDSTPQGLLTRIDQIAQITHTEQHAQKLKENVQ 141
           ++  D       + QL+S G ++   +S  T + +   I+++ Q+T   + A ++  + +
Sbjct: 66  VVVWDTGNKAEDINQLKSLGFKL-YSSSPQTLEDVAKEIEELGQLTGHVELANQVATDYR 124

Query: 142 QQINALQAKRPEKPKKVLFLLLHEGRAANVAGSDTVPDTIIGLIGAHNPASPSITSYKPL 201
           +++  L+ +   K +  +F  L       VA +  +   IIG+    N    + + Y  +
Sbjct: 125 RELLRLRNENAAKSEPKVFYQLWSTPLMTVAKNSWI-QQIIGVCHGKNVFYDAASDYPQV 183

Query: 202 SMESMIEMQPDMVLVS 217
           S+E+++   P+++L S
Sbjct: 184 SLENVLLTLPEVILQS 199