Pairwise Alignments

Query, 277 a.a., hemin ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., hemin ABC transporter, periplasmic hemin-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  188 bits (477), Expect = 1e-52
 Identities = 111/264 (42%), Positives = 162/264 (61%), Gaps = 15/264 (5%)

Query: 24  RIVSAGSAVTELILALGAEQQLVAVDVTSEVPSSLN-LPTVGYHRRLAAEGLLTLEPTHL 82
           ++VSAG+ VTEL+LAL A  +LVAVD TS VP  L+ +  +GYHR L+AEG++ L PT +
Sbjct: 48  KLVSAGAGVTELVLALDAADELVAVDATSYVPEQLSSVAKLGYHRMLSAEGIMALSPTLV 107

Query: 83  IGSDEMGPDTALQQLRSSGIQVNVINSDSTPQGLLTRIDQIAQITHTEQHAQKLKENVQQ 142
           +GSD MGP+T L  L+ + I+V  + S +  Q L++ ID +AQ  +    A  LK+ + Q
Sbjct: 108 VGSDVMGPETTLNVLKQANIKVVQLPSSADEQQLMSNIDTLAQSLNRTDKAAPLKQELHQ 167

Query: 143 QINALQAKRPEKPK-----KVLFLLLHEGRAANVAGSDTVPDTIIGLIGAHNPASPSITS 197
           +++ L  ++ +  +     K+LF+LL EGR A V G  T  DTII L GA N A      
Sbjct: 168 RLDKLNKQKQQLSQHNAQPKILFMLLQEGRGARVGGKGTAADTIIALSGAKNIA--DFEG 225

Query: 198 YKPLSMESMIEMQPDMVLVSGRSLEKLGG------ADAVLNAVPMLAATPAGQNKNIVAI 251
           YK LS E ++ +QPD++L+S RS EK           A+L  +P+LA TPAGQN +I  +
Sbjct: 226 YKTLSQEGILALQPDVILLSNRS-EKTDSQTNSQTTHALLKEMPLLAHTPAGQNGHIQTL 284

Query: 252 DGHALVGGLGLKSLQEAQRIQTLL 275
              AL+GGLG+ ++  A+ +   L
Sbjct: 285 APQALLGGLGISAIGAAETLADAL 308