Pairwise Alignments

Query, 277 a.a., hemin ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., iron compound ABC transporter, periplasmic iron compount-binding protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 25/271 (9%)

Query: 24  RIVSAGSAVTELILALGAEQQLVA-VDVTSEVPSSLNLPTVGYHRRLAAEGLLTLEPTHL 82
           RI++   A  E+++ +G   ++VA  D    +P+   LP +G H R   E +  L P  +
Sbjct: 30  RIIALYGAFNEILVEMGQSGRIVARTDADEAIPALAGLPAIGTHMRPNPELVAGLAPDLI 89

Query: 83  IGSD-EMGPDTALQQLRSSGIQVNVINSDSTPQGLLTRIDQIAQITHTEQHAQKLKENVQ 141
           +  +      T++  LR+ GI V V    S    L + + ++  +T  EQ A  L+    
Sbjct: 90  LQMEGRREAATSVDALRALGIPVAVFRVASFGD-LFSVLHRMGTLTGAEQDAAALEARWT 148

Query: 142 QQINALQ---AKRP------------EKPKKVLFLLLHEGRAANVAGSDTVPDTIIGLIG 186
            +++ +    A++P            + P +V+F + +    A  AG+D++ + II   G
Sbjct: 149 ARLDTVAGAIARQPHDTGTADGKDHTQHPPRVVFEVRYPNLLA--AGADSIVNDIITRAG 206

Query: 187 AHNPASPSITSYKPLSMESMIEMQPDMVLVSGRSLEKLGGADAVLNAVPMLAATPAGQNK 246
             N         + L+ E ++ M PD  +        +       +  P   A  A ++ 
Sbjct: 207 GVNAVQQPGRVVR-LNEEELLRMAPDAYVY---QYGPMNPTPVAPDQRPHFTALDAIRDG 262

Query: 247 NIVAIDGHALVGGLGLKSLQEAQRIQTLLYP 277
            ++ +D HA     G +S++  +++   L+P
Sbjct: 263 RVLKVDEHAF-SRPGPRSVEAVEQLARFLHP 292