Pairwise Alignments

Query, 277 a.a., hemin ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., periplasmic binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  140 bits (353), Expect = 3e-38
 Identities = 92/276 (33%), Positives = 151/276 (54%), Gaps = 10/276 (3%)

Query: 7   LALLLACCTSGISFAQERIVSAGSAVTELILALGAEQQLVAVDVTSEVPSSLN-LPTVGY 65
           LAL+L   T  +  A +R+++ G A+TE++ ALG + +LV  D TS  P     LP VGY
Sbjct: 5   LALILFLVTGPV-LASDRVLAIGGAITEIVYALGEDARLVGRDTTSVFPPEAEALPDVGY 63

Query: 66  HRRLAAEGLLTLEPTHLIGSDEMGPDTALQQLRSSGIQVNVINSDSTPQGLLTRIDQIAQ 125
            R L+ EG+L+L P  +I  +  GP  AL  L S+ + + ++ +    +GL+++I  I+ 
Sbjct: 64  MRALSPEGVLSLAPDLIIADEGAGPAEALDVLTSARVPIVMVPNQPDAEGLVSKIMTISD 123

Query: 126 ITHTEQHAQKLKENVQQQINALQAKRPE-----KPKKVLFLLLHEGRAANVAGSDTVPDT 180
                +   +L E V+  +   +A+  E      PK+VLF+L  +G     +G+DT    
Sbjct: 124 ALGVPERGAELAEAVKSDLEKARARVAELSDGDDPKRVLFILSTQGGRILASGTDTAAAA 183

Query: 181 IIGLIGAHNPASPSITSYKPLSMESMIEMQPDMVLVSGRSLEKLGGADAVLNAVPMLAAT 240
           +I L G  N A+     YKPL+ E++  + PD++L+  R  +     D +L A+P LA+T
Sbjct: 184 MITLAGGVN-ANTGFEGYKPLNDEAVTALAPDLILMMDRGGDHDVAVDELL-AMPALAST 241

Query: 241 PAGQNKNIVAIDGHALVGGLGLKSLQEAQRIQTLLY 276
           PA QN+ +V +DG  L+ G G ++ Q  + +   LY
Sbjct: 242 PAAQNRAVVRMDGLFLL-GFGPRTAQAVRDLSLALY 276