Pairwise Alignments

Query, 277 a.a., hemin ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., periplasmic binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  189 bits (480), Expect = 6e-53
 Identities = 112/280 (40%), Positives = 169/280 (60%), Gaps = 12/280 (4%)

Query: 6   SLALLLACCTSGISFAQERIVSAGSAVTELILALGAEQQLVAVDVTSEVPSSL-NLPTVG 64
           SL+   A  ++     + ++VSAG+ VTEL+LAL A  +LVAVD TS +P  L ++  +G
Sbjct: 24  SLSTFAALFSTNALSQEIKLVSAGAGVTELVLALDAADELVAVDSTSYLPEHLASIAKLG 83

Query: 65  YHRRLAAEGLLTLEPTHLIGSDEMGPDTALQQLRSSGIQVNVINSDSTPQGLLTRIDQIA 124
           YHR L+AEG++ L PT ++GS+ MGP+T L  L+ + I+V  + S +  + L+T ID +A
Sbjct: 84  YHRMLSAEGIMALSPTLVVGSEVMGPETTLNVLKQAKIEVVKLPSSADEKQLMTNIDTLA 143

Query: 125 QITHTEQHAQKLKENVQQQINAL----QAKRPEKPKKVLFLLLHEGRAANVAGSDTVPDT 180
           Q+      A KLK+++ Q++  L    Q  + +   K+LF+LL EGR A V G  T  DT
Sbjct: 144 QLLKRTDQAIKLKQDLHQRLEGLNKQQQLSQQQAQPKILFMLLQEGRGARVGGKGTAADT 203

Query: 181 IIGLIGAHNPASPSITSYKPLSMESMIEMQPDMVLVSGRSLEKLGGAD-----AVLNAVP 235
           II L GA N A      YK LS E ++ +QPD++L+S RS +     D     A+L  +P
Sbjct: 204 IIALSGAKNIA--DFEGYKSLSQEGILSLQPDVILLSKRSEQSDTQTDEQTAQALLKEMP 261

Query: 236 MLAATPAGQNKNIVAIDGHALVGGLGLKSLQEAQRIQTLL 275
           +LA TPAG+N +I  +   AL+GGLG+ ++  A+ +   L
Sbjct: 262 LLAHTPAGKNGHIQTLAPQALLGGLGISAIGAAETLAATL 301