Pairwise Alignments

Query, 138 a.a., biopolymer transporter exbD1 from Vibrio cholerae E7946 ATCC 55056

Subject, 148 a.a., Tol biopolymer transport system, TolR protein from Pseudomonas fluorescens FW300-N2E2

 Score = 47.8 bits (112), Expect = 7e-11
 Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 16/147 (10%)

Query: 1   MIKSSAKHNDFGLTPDLTPLLDIIFIVMVFLLLTASVRLESLEVALPTTDSPVV-NEVNK 59
           ++K   KH       ++ P +D++ +++V  ++TA +  + +++ LP   S  + N+  +
Sbjct: 2   LVKPQRKHGPKA-EMNVVPYIDVMLVLLVIFMVTAPMLTQGVKIELPKVASEALANDSRQ 60

Query: 60  ESITVNILATEPY-WAIDGKPYLDWHNF--SLALLESVQVDKRPVV---------IAADQ 107
           + +T+++ A   Y W + G+  LD H+   S   LE ++V    VV         I AD+
Sbjct: 61  QILTLSVKAEGGYYWNLGGE--LDTHHATDSAVDLEQMRVKVAQVVAERSDTQVYIRADE 118

Query: 108 GAEVQQLVKLLSFLQENGIQATQLLTE 134
            A+  ++V  ++ LQ+ G+    L+TE
Sbjct: 119 HADYGRVVAAMAALQQGGVSNLGLVTE 145