Pairwise Alignments

Query, 228 a.a., biopolymer transporter exbB1 from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., MotA/TolQ/ExbB proton channel family protein from Pseudomonas fluorescens FW300-N2E2

 Score = 59.7 bits (143), Expect = 5e-14
 Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 6/89 (6%)

Query: 88  QFDKSLREDAAGIWLQEQRHQFNSGLRLLTLIGVISPLLGLLGTVLGLIEMFKGVAATTG 147
           + +++LR+      +  +R    SGL +L  IG  SP +GL GTV G++   KG++A  G
Sbjct: 102 RLERALRQQ-----IVRERRSLESGLAILASIGSTSPFIGLFGTVWGIMSALKGISA-AG 155

Query: 148 SITPNVLADGLGVAMYTTAAGLLIAVPAV 176
           S +   +A  +G A+  T  G+ +AVPAV
Sbjct: 156 SASLETVAGPIGAALVATGVGIAVAVPAV 184