Pairwise Alignments

Query, 228 a.a., biopolymer transporter exbB1 from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., outer membrane transport energization protein ExbB from Pseudomonas syringae pv. syringae B728a

 Score = 57.4 bits (137), Expect = 2e-13
 Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 25/200 (12%)

Query: 18  LFICSALTVMLLAERLFQVLLSLTVGKGAIRHALQATSPKNPKQLAELTEHFASKRPVLY 77
           L I S +T  LL  + FQ      + +   R+A Q  + ++ K    L     S   +  
Sbjct: 17  LVIFSLVTWALLLGKTFQ---HWRLTRQNRRYATQFWAARDLKNALHLPHSEGSLARLTD 73

Query: 78  RGVAMLLAHHQ-------------FDKSLREDAAGIWLQEQRHQFNSGLRLLTLIGVISP 124
            G   L A H               ++SLR+      + ++R +  SG+ LL  IG  +P
Sbjct: 74  AGAQALAAPHDSPDLGHSWNRQDLLERSLRQQ-----IHKERRRLESGMILLASIGSTAP 128

Query: 125 LLGLLGTVLGLIEMFKGVA-ATTGSITPNVLADGLGVAMYTTAAGLLIAVPAVAGAQLLS 183
            +GL GTV G+I     ++ A + SI   V+A  +G A+  T  G+ +AVPAV       
Sbjct: 129 FIGLFGTVFGIIHALSAISQAKSASIA--VVAGPIGEALVATGVGIAVAVPAVLAYNFFG 186

Query: 184 LWADRTMAKLEH-TLNYVNL 202
                 +A LE   ++++NL
Sbjct: 187 RRLKLVIADLEEFAVDFLNL 206