Pairwise Alignments

Query, 228 a.a., biopolymer transporter exbB1 from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 30/214 (14%)

Query: 9   QQLGLMA------WPLFICSALTVMLLAERL-------FQVLLSLTVGKGAIRHALQATS 55
           +Q+GL A      W LF+ + L V L+   L       + +++  ++  G +R  L    
Sbjct: 2   EQVGLAATSDVTLWSLFMQAGLVVKLVMLGLIAASVWTWAIVVDKSLNYGRVRRQLDNFE 61

Query: 56  PK--NPKQLAELTEHFASKRPVLYRGVAMLLAHHQFDKSLREDAAG-------------I 100
               + + L EL     S R     G   + A  ++ KS    A               +
Sbjct: 62  QVFWSGQSLEELYRTL-SDRQTSGMGAIFVSAMREWKKSFERGARAPIGLQMRIDRAMDV 120

Query: 101 WLQEQRHQFNSGLRLLTLIGVISPLLGLLGTVLGLIEMFKGVAATTGSITPNVLADGLGV 160
            L  +     + L  L  IG  +P +GL GTV+G++  F+ +A +  S    V+A G+  
Sbjct: 121 TLARESEALEARLGSLATIGSAAPFIGLFGTVVGIMTSFQAIAGSK-STNLAVVAPGIAE 179

Query: 161 AMYTTAAGLLIAVPAVAGAQLLSLWADRTMAKLE 194
           A+  TA GLL A+PAV      +  A +  A++E
Sbjct: 180 ALLATAIGLLAAIPAVIAYNKFTADAGKLTARME 213