Pairwise Alignments

Query, 249 a.a., energy transducer TonB from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., Ferric siderophore transport system, periplasmic binding protein TonB from Pseudomonas fluorescens FW300-N2E2

 Score =  100 bits (248), Expect = 4e-26
 Identities = 77/248 (31%), Positives = 111/248 (44%), Gaps = 42/248 (16%)

Query: 12  VIAGGLSLAFHALLLITTDEAQVFAMPAGNPT---QSVSINMVSMPKVAPAQPEQTQTEQ 68
           ++ G   L  H  +++  ++A    +P   P     ++  +  + P V P      Q   
Sbjct: 53  LLLGAFVLVLHGAVIVWVNQAPAPVLPVVPPEIPPMTIEFSQPAPPVVPPPPAPVVQ--- 109

Query: 69  SKPESVKPTPVQE--VVKTPPAKPKVKPH---KPKPQTVKKPV---PAEQVPSKSVAKPQ 120
             P    P+PV+E   VK  P KP +KP    KP P+ V KPV   PA   P + VA P 
Sbjct: 110 --PAVEPPSPVEEELAVKPAPPKPILKPKPVVKPVPKPVAKPVEPPPAPPAPPQPVAAPA 167

Query: 121 PEKVERTAETAQKPAPTPNQQPSQPTAASQGITSQPILVDKPALVSAQVQPRYPRIARKR 180
           P            PAP P  +P  P +AS G    P              P YP +A +R
Sbjct: 168 P------------PAP-PAPKPVTPPSASAGYLKNPA-------------PEYPSLAMRR 201

Query: 181 GIEGTVMYEIWLDAQGNQIKQQLLSSSGTEALDQSALEAIKQWKFSPHILDGVPVAHRIH 240
           G EGTV+  + + A G   + QL  SSG + LD +AL A+K+W F P     V +   + 
Sbjct: 202 GWEGTVLLRVHVLASGKPGEIQLQKSSGRDQLDAAALAAVKRWSFVPAKQGDVAMDGWVS 261

Query: 241 IPIRFKLE 248
           +PI FK++
Sbjct: 262 VPIDFKIK 269