Pairwise Alignments

Query, 249 a.a., energy transducer TonB from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., TonB1 protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 43/275 (15%)

Query: 10  RYVIAGGLSLAFHALLLI---TTDEAQVFAMPA--GNPTQSVSINMVSM----PKVAPAQ 60
           RY+  G L++A    ++    T  + ++   P   G   Q V++N V++    P++A A 
Sbjct: 5   RYLAFGALTVAIQTGVIASQPTPAQLKIVNSPTIQGESHQRVTLNPVTLNFAKPQIAAAS 64

Query: 61  PEQTQTEQSKPESVKPTPVQEVV--KTPPAKPKVKPHKPKP----QTVKKPVPAEQVPSK 114
            +  +   +K +S   + V  V    T  A+PK+    PK     +T +K      +  K
Sbjct: 65  -DAARNAVNKTQSHHASLVHTVTAPSTRAAQPKLTTSTPKKNVQSKTEQKQSITASIDKK 123

Query: 115 SVAKPQPEKVERTAETAQ-------------------KPAPTPNQQPSQPTAASQGITSQ 155
           ++A+P+ ++ +    TA                    KP P+ N+QP    + +      
Sbjct: 124 TIAQPKSKQSQEHHYTANTDNLKSTEKMAAHAELVPTKPTPSLNEQPHSMDS-NMAPHQT 182

Query: 156 PILVDKPALVSAQVQPRYPRIARKRGIEGTVMYEIWLDAQGNQIKQQLLSSSGTEALDQS 215
            + +  P   S   QP YPR+ARK+G+EGT   E+  +  G Q+   L+ SSG   LDQ+
Sbjct: 183 VVELTSPTFASQPPQPTYPRMARKKGLEGTATIEVMFNEFGQQLALTLVKSSGVSLLDQA 242

Query: 216 ALEAIKQWKF---SPHILDGVPVAHRIHIPIRFKL 247
           ALEA++ W+F   SP +       +++ +PIRF L
Sbjct: 243 ALEAVETWQFEAPSPKLAS----HYKVRVPIRFAL 273