Pairwise Alignments

Query, 455 a.a., heme anaerobic degradation radical SAM methyltransferase ChuW/HutW from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB from Pseudomonas fluorescens FW300-N2E2

 Score = 94.4 bits (233), Expect = 6e-24
 Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 21/277 (7%)

Query: 66  LYIHVPFCRVRCTFCNFFQNAASRQLVDA-YFAALLEEIKQKAALPWTQTGVFHAVYIGG 124
           LY+H+P+C  +C +C+F  + AS QL +  Y  ALL ++ Q   L         +++ GG
Sbjct: 7   LYVHIPWCVRKCPYCDFNSHTASPQLPEEEYVDALLADLDQD--LHAAHGRPLSSIFFGG 64

Query: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184
           GTP+  S + + +L   +    P   D EITLE     F  E F      G NR S G+Q
Sbjct: 65  GTPSLFSAQALGRLLKGVEARIPFAQDIEITLEANPGTFEQEKFVAYRALGINRLSIGIQ 124

Query: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQA---PIVIDLLYGLPYQTAQVFEQDLQDF 241
           SF         R+ + +   E + +    +QA      +DL++GLP Q+      DL   
Sbjct: 125 SFQQAKLEALGRIHNGD---EAVRAAGMARQAGFDNFNLDLMHGLPDQSLDDALGDLSQA 181

Query: 242 MQTGAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQI---GVEFMAKHHLRP 298
           +      +  YQL +  +    N         P T P+  +L+ I   G   +A+H    
Sbjct: 182 IALKPTHLSWYQLTLEPNTVFWN--------QPPTLPEDDTLWDIQEAGQALLAEHGYAQ 233

Query: 299 LSVNHWTRDNRERSLYNSLAKTYAEVLPIGCGAGGNM 335
             V+ + +  R  + +N    ++ + + IG GA G +
Sbjct: 234 YEVSAYAQPGR-AARHNLNYWSFGDFIGIGAGAHGKL 269