Pairwise Alignments

Query, 455 a.a., heme anaerobic degradation radical SAM methyltransferase ChuW/HutW from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., coproporphyrinogen III oxidase (RefSeq) from Shewanella loihica PV-4

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 92/346 (26%), Positives = 148/346 (42%), Gaps = 31/346 (8%)

Query: 66  LYIHVPFCRVRCTFCNFFQNAASRQLVDAYFAALLEEIKQKAALPWTQTGVFHAVYIGGG 125
           LY HVPFC   C+FC F +     +   AYF +L +E++   AL +     F ++YIGGG
Sbjct: 65  LYAHVPFCHTLCSFCTFHRFLFKEEKARAYFVSLRKEMEMVKALGYD----FESMYIGGG 120

Query: 126 TPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQS 185
           T T L  E  R +  A ++ FP     E++ E          F+  LEG  +R S GVQS
Sbjct: 121 TTTVLEDELARTIEFA-KKLFPSIK--EVSCESDPQHLDSPGFKQ-LEGLVDRMSIGVQS 176

Query: 186 FNTQVRRRAKRLD---DREVVMERIASLAATQQAPIV-IDLLYGLPYQTAQVFEQDLQDF 241
           FN  +     RL+     +   ++I  +AA +  PI+ +DL++G   QT +V + DL   
Sbjct: 177 FNDDILAMTDRLEKFGSGQQTFDKI--MAAKELFPIINVDLIFGFRGQTDEVIQHDLDMA 234

Query: 242 MQTGAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSV 301
            +   + I  Y L++           KGKL  P    D A  Y+   + +   + +   +
Sbjct: 235 SRLDPRQITTYPLMI---THQTRKSVKGKLAAP--QGDMARQYR---QILNSLNGQYNQL 286

Query: 302 NHWTRDNRERSLYNSLAKTYAEVLPIGCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLVA 361
           + W         ++     Y E L +G G+   +     +    L  Y + + +G+  V 
Sbjct: 287 SAWAFGKANNEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQENIASGRMGVE 346

Query: 362 MMARQHEYDPLFAALKAGFDAGVIAKQRLPKFYHHQTF----DWLM 403
                 + D +      G  +G     RL + Y   TF    DW +
Sbjct: 347 QQKNYSQKDVMQYRFLLGMFSG-----RLSRKYFRDTFGVNLDWAL 387