Pairwise Alignments

Query, 455 a.a., heme anaerobic degradation radical SAM methyltransferase ChuW/HutW from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., oxygen-independent coproporphyrinogen III oxidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 76/308 (24%), Positives = 131/308 (42%), Gaps = 19/308 (6%)

Query: 66  LYIHVPFCRVRCTFCNFFQNAASR-QLVDAYFAALLEEIKQKAALPWTQTGVFHAVYIGG 124
           LYIH+PFC   C +C   +         D Y   L  EI ++A  P  +      ++ GG
Sbjct: 56  LYIHIPFCAKLCYYCGCNKVITRHAHKADQYIEYLSHEIIKRA--PLFKHYSVTQMHWGG 113

Query: 125 GTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQ 184
           GTPT L+PEQI +L   I+ +F    + E ++E         M +   E GFNR S GVQ
Sbjct: 114 GTPTFLNPEQIIKLTALIKANFNFADEGEFSIEVDPREIELSMLDTLKEAGFNRISIGVQ 173

Query: 185 SFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQT 244
            FN +V+    R  D + + + +A   A       IDL+YGLP+QT + F   +Q  +  
Sbjct: 174 DFNKEVQVAVNREQDEQFIFDLMAKAKAMGFVSTNIDLIYGLPHQTPETFAATMQRVLDL 233

Query: 245 GAQGIDLYQLV-VGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSVNH 303
               + ++    +         ++   LP P     K  +    +E +     + + ++H
Sbjct: 234 SPDRLSVFNYAHLPARFAAQRKIKDEHLPSP---KQKLEMLHQTIETLTGAGYQYIGMDH 290

Query: 304 WTRDNRE-----------RSLYNSLAKTYAEVLPIGCGAGGNMGGYSLMQHRQLDTYLDA 352
           + + + E           R+      +   ++L +G  +   +G       + +  Y +A
Sbjct: 291 FAKPDDELAKLQREGKLHRNFQGYTTQEECDLLGLGVSSISQIGDCYAQNQKDIRPYYEA 350

Query: 353 M-KNGQPL 359
           + K+G  L
Sbjct: 351 IDKDGHAL 358