Pairwise Alignments

Query, 455 a.a., heme anaerobic degradation radical SAM methyltransferase ChuW/HutW from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 88/338 (26%), Positives = 146/338 (43%), Gaps = 27/338 (7%)

Query: 66  LYIHVPFCRVRCTFCNFFQNAASRQLVDAYFAALLEEIKQKAALPWTQTGVFHAVYIGGG 125
           LY HVPFC   C++C F +         AYF +L +E++   AL +     F ++YIGGG
Sbjct: 63  LYAHVPFCHTLCSYCTFHRFMFKEDKARAYFISLRKEMEMVKALGYD----FESMYIGGG 118

Query: 126 TPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQS 185
           T T L  E  R +  A +  FP     E++ E          F+  L+G  +R S GVQS
Sbjct: 119 TTTVLEDELARTIEHA-KTLFPSIK--EVSCESDPQHLDSPGFKQ-LKGLVDRMSIGVQS 174

Query: 186 FNTQVRRRAKRLD---DREVVMERIASLAATQQAPIV-IDLLYGLPYQTAQVFEQDLQDF 241
           FN  + +   RL+     +   ++I  +AA +  PI+ +DL++G   QT +V + DL   
Sbjct: 175 FNDDILKMTDRLEKFGTGQQTFDKI--MAAKELFPIINVDLIFGFRGQTDEVIQHDLDMA 232

Query: 242 MQTGAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSV 301
            +   + I  Y L++           KGKL  P    D A+ Y+   + +   + +   +
Sbjct: 233 SRLDPRQITTYPLMI---THQTRKSVKGKLAAPQA--DMANQYR---QILNSLNGQYNQL 284

Query: 302 NHWTRDNRERSLYNSLAKTYAEVLPIGCGAGGNMGGYSLMQHRQLDTYLDAMKNGQPLVA 361
           + W         ++     Y E L +G G+   +     +    L  Y + +  G+  V 
Sbjct: 285 SAWAFGKANDEGFDEYVIDYDEYLGVGSGSFSFLNDTLYVNTFSLRKYQERIAAGKMGVE 344

Query: 362 MMARQHEYDPLFAALKAGFDAGVIAKQRLPKFYHHQTF 399
                ++ D +      G  +G     RL + Y  +TF
Sbjct: 345 QQKNYNKKDVMQYRFLLGMFSG-----RLSRKYFRETF 377