Pairwise Alignments

Query, 455 a.a., heme anaerobic degradation radical SAM methyltransferase ChuW/HutW from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., coproporphyrinogen III oxidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  108 bits (271), Expect = 2e-28
 Identities = 87/379 (22%), Positives = 168/379 (44%), Gaps = 23/379 (6%)

Query: 66  LYIHVPFCRVRCTFCNFFQNAASRQLVDAYFAALLEEIKQKAALPWTQTGVFHAVYIGGG 125
           +Y+H+PFC+ RC +C+F+    S +L   Y   L  E++ +    + +      +Y GGG
Sbjct: 4   IYLHIPFCKTRCIYCDFYSTTRS-ELKTHYVHTLCRELEMRKE--YLKGEPVETIYFGGG 60

Query: 126 TPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNRFSFGVQS 185
           TP++L     + +   IRE++ +    EITLE      S E  +      FNR S G+Q+
Sbjct: 61  TPSQLEEADFKHIFETIRENYGMEHCREITLEANPDDLSQEYLKMLSSLPFNRISMGIQT 120

Query: 186 FNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDLQDFMQTG 245
           F+    +  KR    +  +E +          I IDL+YGLP +T + +  DL+  ++  
Sbjct: 121 FDDTTLQLLKRRHSSQTAVEAVRRCREAGFQNISIDLIYGLPGETKERWVNDLRQAIRLD 180

Query: 246 AQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKASLYQIGVEFMAKHHLRPLSVNHWT 305
            + I  Y L      P+ N++++ ++       D+ S  Q     +   HL+     H+ 
Sbjct: 181 VEHISAYHLTYEEDTPIYNMLKQHQI----EEVDEDSSLQFFT--LLIEHLQNAGYEHYE 234

Query: 306 RDNRER-SLYNSLAKTYAEVLP-IGCGAGGNM--GGYSLMQHRQLDTYLDAMKNGQ---- 357
             N  R   Y+    +Y   +P +GCG   +   G         +D Y+  ++  Q    
Sbjct: 235 ISNFCRPDKYSRHNTSYWRGIPYLGCGPSAHSFNGTTREWNVSSIDLYIKGIEGNQRDFE 294

Query: 358 -PLVAMMARQHEYDPLFAALKAGFDAGVIAKQRLPKFYHHQTFDWLMPLFLRWQQIGLVE 416
              +    R +E+  +   ++  +   +   ++L + + ++ +++   +   + + G +E
Sbjct: 295 TENLDQTTRYNEF--IITTIRTVWGTPI---EKLKQEFGNELWEYCRKMSAPYLENGKLE 349

Query: 417 VEQDYLTLTTAGRFWSVSL 435
           + +  L LT  G F S S+
Sbjct: 350 IHEGALRLTREGIFISDSI 368