Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  198 bits (504), Expect = 4e-55
 Identities = 124/384 (32%), Positives = 201/384 (52%), Gaps = 1/384 (0%)

Query: 194 KIMAPIDRFFQELETRTAQQFNQAAEQVKSTVLIGNISLVVVAIIAIIGYVVVNRKIVTP 253
           K+M  +       + + ++    A +Q  +   +    +VV  I A++  + ++R I  P
Sbjct: 177 KVMDQLTIMIDSNDRQISEDAKAATQQEVTAKTVLYSGIVVAFIAALLLGMFISRLISRP 236

Query: 254 IDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSI 313
           I       QR     DLT  +   S DE   + + +  +  S  +TI +I   +  ++S 
Sbjct: 237 IAVAVDCAQRIAQG-DLTQHITSNSRDEAGQLLKALGDMQTSLKTTIQQIASASDQLASA 295

Query: 314 SDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNS 373
           ++ + ++TD   +   +Q+ E++ AATA+ EMTSA+  V+++     + + S   +A+  
Sbjct: 296 AEELTAVTDDGSRALIRQNDEIQQAATAVTEMTSAVEEVARNAVSTSQASQSTSSQASEG 355

Query: 374 KQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEA 433
           +      ++       E   ++ +++ LA +  ++G VLDVI+ IAEQTNLLALNAAIEA
Sbjct: 356 RDQARSAVQAINTATQEITSSTGLVKDLAVQVRDIGKVLDVIRGIAEQTNLLALNAAIEA 415

Query: 434 ARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTR 493
           ARAGEQGRGFAVVADEVR+LA RTQ STGEIE+MI  +Q++A+ +   +  S   +  T+
Sbjct: 416 ARAGEQGRGFAVVADEVRALAARTQASTGEIESMIHAVQDRADSAVDAMGKSQALVTETQ 475

Query: 494 GNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIK 553
                  E+L  I  +  +I+  N  IA A+EEQ  V+ E+  NL  I+ LS +      
Sbjct: 476 DLARATGEALEQIADNISQINDRNLVIATASEEQAHVAREVDRNLVNIQDLSTQTAAGAN 535

Query: 554 QLGPVVVDLQRNVDDLNSAIAHIR 577
           Q      +L       NS +   R
Sbjct: 536 QTNASSQELSNLALSFNSLVGRFR 559