Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

 Score =  211 bits (537), Expect = 6e-59
 Identities = 128/346 (36%), Positives = 196/346 (56%), Gaps = 1/346 (0%)

Query: 233 VVVAIIAIIGYVVVNRKIVTPIDRMASVLQR-ADDNSDLTLRVEEKSDDELAVIGRTINK 291
           +V+A+I  +  +++ R IV P+    + +   A   SDLT  ++    DE+  + R  N 
Sbjct: 198 LVIALIMALLVIMIARSIVRPLQETVNAMANIASGESDLTRSLDTHGQDEVTQLARHFNA 257

Query: 292 VLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSS 351
                   IS++      +   S+ + +   Q  + S QQ Q++E+ ATA+ E+T  +  
Sbjct: 258 FTAKLRLVISQLQVSAGALGQSSNELGNDAAQAQQRSQQQSQQMELVATAINEVTYGVQD 317

Query: 352 VSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNV 411
           V+++   A     +AE +A   +   + ++++   L     +  E+I+ LA ES  +G+V
Sbjct: 318 VAKNAEHAASEMRNAESQAQQGQVNIDGSLQQIDKLSSTIDQAVEVIRTLAAESTQIGSV 377

Query: 412 LDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISML 471
           L+VI++IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LAQRTQ+ST EI++MI  L
Sbjct: 378 LEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQSMIERL 437

Query: 472 QEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVS 531
           Q  +E + K I  S+   Q T    G+A  SL AI  + + ++ LN SIA+AT +Q  V 
Sbjct: 438 QSHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNGLNASIASATLQQAHVV 497

Query: 532 DEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
           ++I+ N++    LS    LA +Q     V L+   + LN  +   R
Sbjct: 498 EDINQNVTQAAGLSHSTALAAEQSSVASVHLKELSEQLNGLLKQFR 543