Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 522 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  175 bits (444), Expect = 4e-48
 Identities = 101/221 (45%), Positives = 142/221 (64%), Gaps = 4/221 (1%)

Query: 329 SQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLD 388
           +QQ+QE E  ATA+ EM +    V+ +  +A E    A +   + ++V  +T +    L 
Sbjct: 273 AQQNQETEQVATAINEMAATTQEVASNVALAAEATREASRLTIHGREVTAETRKAIQQLA 332

Query: 389 GEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 448
                T E + QLA +S+ +G V+DVIK+IA+QTNLLALNAAIEAARAG+ GRGFAVVAD
Sbjct: 333 DSVASTGEAVNQLANDSDAIGGVVDVIKSIADQTNLLALNAAIEAARAGDSGRGFAVVAD 392

Query: 449 EVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRG--NMGVANESLVAI 506
           EVR LAQRT E+TGEI  +I  LQ +A  + +T      ++Q+TRG   +  A+++L  I
Sbjct: 393 EVRQLAQRTAEATGEIHQLIEKLQLQARHAVQT--TEEGRVQATRGVDQVAQADQALTGI 450

Query: 507 QGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGE 547
             +   I  + T IA+ATEEQ  V+DEIS+N+STI  L+ +
Sbjct: 451 NEAMGNIIDMTTQIASATEEQSAVADEISNNVSTIARLADQ 491