Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  199 bits (505), Expect = 3e-55
 Identities = 120/352 (34%), Positives = 198/352 (56%), Gaps = 3/352 (0%)

Query: 226 LIGNISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVI 285
           +IG I L V+  + +    +  R IV P+ +  S+ +    + DLT  ++    DE A +
Sbjct: 190 MIGTIVLAVLLTVVLAW--IFTRSIVQPLQQAVSIAEVVA-SGDLTRHIDIVGRDEPARL 246

Query: 286 GRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEM 345
              +  +      TI  I+  +  ++S ++ +  +T+ + +  +QQ  E+E AATA+ EM
Sbjct: 247 LTALRSMQERLRGTIQSISHSSSQLASAAEQLNVVTEDSTRGMNQQSHEIEQAATAVNEM 306

Query: 346 TSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATES 405
           T+A+  V+++     E +  ++  A + +    +T+     L G+  +TS  +++LA + 
Sbjct: 307 TAAVDEVARNAVATSEASRDSDATAQHGRNQVIRTVDSIGQLAGDVTQTSAEVERLAAQV 366

Query: 406 NNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIE 465
            ++  VLDVI++IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA RTQ+ST EIE
Sbjct: 367 RDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIE 426

Query: 466 TMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATE 525
            MI  + +  + + + ++VS ++ ++T      A E+L  I  +  +I + N  IA+A+E
Sbjct: 427 QMIGDVHQGTDRAVQAMQVSNERARTTLDLARAAGEALEEIAAAISQISERNLVIASASE 486

Query: 526 EQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
           EQ  V+ E+  NL  I+ LS + +    Q      +L R    LN  +   R
Sbjct: 487 EQAQVAREVDRNLVNIRDLSLQSSAGASQSSAASQELARLAVGLNGLVGGFR 538