Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  198 bits (503), Expect = 5e-55
 Identities = 125/373 (33%), Positives = 210/373 (56%), Gaps = 2/373 (0%)

Query: 206 LETRTAQQFNQAAEQVKSTVLIGNISLVVVAIIA-IIGYVVVNRKIVTPIDRMASVLQRA 264
           L    A   +  A +V ++   G +  +++A IA II  +++ R IV P+     V +  
Sbjct: 167 LNRNAANAASAHALEVAASAFQGVVVAMILAFIATIILAMLLTRSIVQPLAEAVGVAE-V 225

Query: 265 DDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQN 324
               DLT   +    DE A +   +  +  S   TI  I+  ++ ++S ++ +  +T+ +
Sbjct: 226 IAGGDLTRHFQVVGSDEPARLLSALQAMQRSLRETIQGISDSSNQLASAAEELNVVTEDS 285

Query: 325 MKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREF 384
            +   QQ+ E+E AATA+ EMT+A+  V+++     E +  +++ A + +Q   +T+   
Sbjct: 286 TRGLHQQNHEIEQAATAVNEMTAAVDEVARNAVATSEASRESDETAQHGRQQVIRTVDSI 345

Query: 385 ADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFA 444
             L  +  +T+  +++LA +  ++  VLDVI++IAEQTNLLALNAAIEAARAG+ GRGFA
Sbjct: 346 GLLADDVTQTATEVERLAGQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFA 405

Query: 445 VVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLV 504
           VVADEVR+LA RTQ+ST EIE MI  + +  + +   +++S ++ ++T      A E+L 
Sbjct: 406 VVADEVRALAHRTQQSTQEIEQMIGDVHQGTDKAVHAMQLSNERARTTLELARAAGEALD 465

Query: 505 AIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQR 564
            I  +  +I + N  IA+A+EEQ  V+ E+  NL  I+ LS + +    Q      +L R
Sbjct: 466 GIASAISQISERNLVIASASEEQAQVAREVDRNLVNIRDLSLQSSAGANQTSAASQELAR 525

Query: 565 NVDDLNSAIAHIR 577
              DLN+ +A  +
Sbjct: 526 LAIDLNNLVARFQ 538