Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  205 bits (522), Expect = 3e-57
 Identities = 114/356 (32%), Positives = 203/356 (57%)

Query: 222 KSTVLIGNISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDE 281
           ++ ++ G I L+++ I  ++  + V   I+  I+ M   +    ++ DL+  V   + DE
Sbjct: 183 RNIMISGAIQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAEDEDLSRSVAIGAKDE 242

Query: 282 LAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATA 341
           +  +G   N+++G +  ++  +  V H ++ +S+ +  + ++ +   ++Q  E +M A+A
Sbjct: 243 IGAMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASA 302

Query: 342 MEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQL 401
           M EM++ +  V+++ N     +  A+ E+    +V  + +     L  E +K +++IQ++
Sbjct: 303 MNEMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRV 362

Query: 402 ATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQEST 461
            ++S ++  VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ+ST
Sbjct: 363 ESDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKST 422

Query: 462 GEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIA 521
            EI+ MI  LQ     + + ++ +  + +S    +  A +SL  I      I+++NT IA
Sbjct: 423 EEIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIA 482

Query: 522 AATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
            A E+Q  V++EI+ N+STI  ++   +    Q   +  +L R   +LN  +   +
Sbjct: 483 TAAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFK 538