Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  211 bits (536), Expect = 8e-59
 Identities = 129/349 (36%), Positives = 199/349 (57%), Gaps = 2/349 (0%)

Query: 230 ISLVVVAIIAIIGYVVVNRKIVTPIDR-MASVLQRADDNSDLTLRVEEKSDDELAVIGRT 288
           I L++ AI+A++  +++ R IV P+   MA++   A   +DLT  ++   +DEL  +GR 
Sbjct: 196 IGLLISAIMAVLVAILI-RSIVRPLRHTMAAMANIASGEADLTRTLDVSGNDELTTLGRD 254

Query: 289 INKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSA 348
            N+      + + ++ +    +   S ++  ++ Q  + S QQ  ++E  ATA+ E+T A
Sbjct: 255 FNRFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAHEQSQQQMLQMEQVATAINEVTYA 314

Query: 349 LSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNV 408
           +  V+++   A    GSAE +A   ++  E ++++  +L     +  ++IQ LA E+  +
Sbjct: 315 VQEVAKNAEHASSEVGSAENQAGQGQRNIETSLQQIDELSATIGQAVDVIQSLADETTKI 374

Query: 409 GNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMI 468
           G+VL+VI +IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LAQRTQ+ST EI  MI
Sbjct: 375 GSVLEVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQQSTAEIHGMI 434

Query: 469 SMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQL 528
             LQ+ +  +   I  S    Q T      A ESL  I  + + +  LN SIA+AT +Q 
Sbjct: 435 ERLQKNSGAAVNVIMESNRASQLTVEQASQAGESLGEIAQALRNLSGLNASIASATLQQS 494

Query: 529 TVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
            V ++I+ N++    L+ E  LA +Q       L      LN  ++  R
Sbjct: 495 HVVEDINQNVTQAAGLAQESTLAAEQSSEAGKQLGELAGQLNRLLSQFR 543