Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  194 bits (493), Expect = 8e-54
 Identities = 119/350 (34%), Positives = 200/350 (57%), Gaps = 2/350 (0%)

Query: 229 NISLVVVAIIAI-IGYVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGR 287
           NI L++  +I   +  +V+ R I  P++ +           DL+  +  +  DE+  + +
Sbjct: 190 NIGLLLALLIGGGLFAMVLLRSISRPLEELKQAAASVAAG-DLSRTIACRGKDEITEVQQ 248

Query: 288 TINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTS 347
           +I ++  +   T+  I      ++S ++ + ++T    +   QQ++E++MAATA+ EM++
Sbjct: 249 SIRQMQQTLRDTLQDIQGSATQLASAAEELHAVTQHTAQGIHQQNEEVQMAATAVTEMSA 308

Query: 348 ALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNN 407
           A+  V+ + N   + +  AE  A++ ++    T +    L  + Q+T+  + +LA E+ +
Sbjct: 309 AVDEVAGNANRTSDASRDAETVADDGRRQVTATRQTIDQLSEKLQQTAGTVTRLAEEAAS 368

Query: 408 VGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETM 467
           +G V+DVI+AIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LAQRTQ ST EIE M
Sbjct: 369 IGQVVDVIRAIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQSSTQEIERM 428

Query: 468 ISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQ 527
           I  +Q   E S + ++ S++    ++   G A+++L  I     +I+++N  IA+A EEQ
Sbjct: 429 IGAIQSATEQSVRDMQQSSEFATRSQTMAGEADQALGLIAERVGQINEMNLVIASAAEEQ 488

Query: 528 LTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
             V+ E+  NL  I+ +S +     +Q      +L R    LN  +   R
Sbjct: 489 AQVAREVDRNLVAIRDISEQSATGAQQTSVASDELARLATHLNQLVGRFR 538