Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  212 bits (539), Expect = 4e-59
 Identities = 125/345 (36%), Positives = 199/345 (57%), Gaps = 5/345 (1%)

Query: 232 LVVVAIIAIIGYVVVNRKIVTPIDRMASVLQRADD--NSDLTLRVEEKSDDELAVIGRTI 289
           L+   ++ ++   ++ + I TPI   A+ L  A+     +LT  +     DE   +   +
Sbjct: 196 LIAATLLTLVFAWMLIKSITTPI---ATALLAAETIAQGNLTRPISIDGTDEAGRLLLAM 252

Query: 290 NKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSAL 349
             +      T+  I+     ++S ++ + ++TD++ +   QQ+ E+E AATA+ +MTSA+
Sbjct: 253 KTMQDKLRDTLQGISGSATQLASAAEELNAVTDESARGLVQQNDEIEQAATAVNQMTSAV 312

Query: 350 SSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVG 409
             V+++     + + SA   A + + + ++T+     + G+ Q T+E+I  LA ES ++G
Sbjct: 313 EEVARNATSTSQASRSAATSAGDGRDLVQETVSAIERMSGDVQGTAELIISLANESRDIG 372

Query: 410 NVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMIS 469
            VLDVI+ +A+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ+ST EIE MIS
Sbjct: 373 KVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIS 432

Query: 470 MLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLT 529
            +Q   E +  ++R S ++ +ST      A ++L  I  + +EI++ N  IA+A EEQ  
Sbjct: 433 SIQTGTEQAVSSMRNSTERAESTLNIAKGAGQALNTINSAVEEINERNMVIASAAEEQAQ 492

Query: 530 VSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIA 574
           V+ E+  NL  I+ LS +      Q      +L R   DLN  +A
Sbjct: 493 VAREVDRNLVNIRDLSAQSTNGANQTSAASTELSRLAIDLNGMVA 537