Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  201 bits (511), Expect = 7e-56
 Identities = 132/395 (33%), Positives = 218/395 (55%), Gaps = 5/395 (1%)

Query: 183 LHSEEYHREKAKIMAPIDRFFQELETRTAQQFNQAAEQVKSTVLIGNISLVVVAIIAIIG 242
           L SE + + ++ +   ID   ++++   A     AA+   S+VL+  I +V+  ++AI+ 
Sbjct: 180 LSSESFTKVRSYMRVMIDSNNRQIKEGAAA----AADLKASSVLMLEIGVVIAFLVAIML 235

Query: 243 YVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISK 302
            V++ R I  P+    +  QR     DLT  +   S DE   +   ++ + G   +TI +
Sbjct: 236 GVLITRMITRPLAVAVASAQRIA-GGDLTQPIVSTSGDEAGQLLNALSDMQGGLKNTIQQ 294

Query: 303 INQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEY 362
           I   +  ++S ++ + ++TD++ +  ++Q+ E++ AATA+ +MT+A+  V+++     E 
Sbjct: 295 IASASDQLASAAEELSAVTDESTRGLTRQNDEIQQAATAVNQMTAAVEEVARNAVSTSEA 354

Query: 363 AGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQT 422
           + SA  +A + +   + T++    +  E   ++  + +LA     +  VLDVI++IAEQT
Sbjct: 355 SKSATDDAVDGRGQVDHTVKGITTMVHEITASTGAVSELAGHVREISKVLDVIRSIAEQT 414

Query: 423 NLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTI 482
           NLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ ST EIE MIS +Q  A+ +   +
Sbjct: 415 NLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQASTVEIEGMISTVQSGADGAVAAM 474

Query: 483 RVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIK 542
             S     +T+     A  +L  I      I++ N  IA+A+EEQ  V+ E+  NL  I+
Sbjct: 475 GKSLSLATNTQELALRAGAALEKITLGVATINERNLVIASASEEQAQVAREVDRNLINIQ 534

Query: 543 TLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
            LS +      Q      +L R     NS +A+ +
Sbjct: 535 DLSTQSAAGANQTSASSQELSRLATSFNSLVANFK 569