Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  220 bits (560), Expect = 2e-61
 Identities = 129/345 (37%), Positives = 200/345 (57%), Gaps = 1/345 (0%)

Query: 233 VVVAIIAIIGYVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKV 292
           V+V ++ I   +++ R+I  P+D      +R  D  DLT  +     DEL ++  T+  +
Sbjct: 298 VIVLLLGIFAAILITRQITRPLDSTVIAARRIADG-DLTNDLSTTRQDELGLLQNTMQHM 356

Query: 293 LGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSV 352
             S  + I  I+     I++ ++ + ++++Q     +QQ  E++  ATAM +M S +  V
Sbjct: 357 TVSLRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVATAMNQMASTVQEV 416

Query: 353 SQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVL 412
           +Q+T  A + A  A   A +   V +   RE + L GE  +  E +Q+L  +S+ +G V+
Sbjct: 417 AQNTEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQRLIQDSDKIGGVI 476

Query: 413 DVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQ 472
           DVIKA+AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQ ST EIE +I  LQ
Sbjct: 477 DVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQSSTTEIEALIKSLQ 536

Query: 473 EKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSD 532
           +    +++ +  S  + + T      A ESL+ I  S   I +++  I+AA EEQ  V+D
Sbjct: 537 DGTGAASELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQISAAAEEQSAVTD 596

Query: 533 EISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
           EI+ ++ +++ ++ +   A +Q     V+L R   +L   +A  R
Sbjct: 597 EINRSVISVRDIADQSATATEQSAASTVELARLGSNLQDMVARFR 641