Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  207 bits (526), Expect = 1e-57
 Identities = 139/388 (35%), Positives = 214/388 (55%), Gaps = 9/388 (2%)

Query: 194 KIMAPIDRFFQELETRTAQQFNQAAEQVKSTVLIGNISLVVVA-IIAIIGYVVVNRKIVT 252
           ++   ID   Q +    A Q +  AE    +  +  + +++V+ II I   +++ R IVT
Sbjct: 156 ELQTAIDALVQ-MNIDQADQLSVRAEAAYESGFMFTVVIIIVSLIITIFLAILLTRSIVT 214

Query: 253 PIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISS 312
           P+  + SV +R   + DL   +    DDE + + R    +  +   TI  I   +  ++S
Sbjct: 215 PLKSLLSVNERIA-SGDLRGDIPVTGDDEFSELQRATLAMQKNLRQTIGLIGNSSQQLAS 273

Query: 313 ISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANN 372
            ++ +  IT Q+     +Q+QE+E AATA+ EMT+A+  V+++   A + A  +      
Sbjct: 274 AAEEMNCITVQSSTGLGRQNQEIEQAATAVNEMTAAVDEVARNAAAASDAAKESNASTVR 333

Query: 373 SKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIE 432
             +    T+     L      TS  +Q+LA +SN++  VL VI+ IAEQTNLLALNAAIE
Sbjct: 334 GAERVASTVTAIEKLSATVLATSADVQRLAGQSNDISKVLAVIRTIAEQTNLLALNAAIE 393

Query: 433 AARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQST 492
           AARAGEQGRGFAVVADEVR+LA RTQ+ST EIE MI  + E +E +T++++ S    Q T
Sbjct: 394 AARAGEQGRGFAVVADEVRALAHRTQQSTQEIEQMIGAVLEGSEQATRSMQESCMGAQDT 453

Query: 493 RGNMGVANESLVAIQGSAK---EIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMN 549
              +GVA+E+  A+   A+   EI+ +NT IA A+EEQ  V+  I  NL +I+ LS +  
Sbjct: 454 ---LGVAHEAGAALDDIARRIEEINDMNTLIATASEEQAQVARSIDHNLISIRDLSVQST 510

Query: 550 LAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
               Q      +L R   ++N  +   +
Sbjct: 511 EGANQTSLASGELSRLAIEMNGVVTRFK 538